Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR5701-1-201ENST00000585138 82 ntBASIC0.01□□□□□ -2.41
CCDC112Q8NEF3 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
CCDC112Q8NEF3 MIR5701-2-201ENST00000615634 82 ntBASIC0.01□□□□□ -2.41
CCDC112Q8NEF3 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
CCDC112Q8NEF3 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
CCDC112Q8NEF3 MIR377-201ENST00000362145 69 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 SNORD115-30-201ENST00000364117 82 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.256-201ENST00000364594 104 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 RNU6-934P-201ENST00000365154 107 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.370-201ENST00000365589 108 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.376-201ENST00000365638 108 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 RNU6-842P-201ENST00000384269 107 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.553-201ENST00000384670 102 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 MIR329-2-201ENST00000385029 84 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 RNU6-679P-201ENST00000391003 106 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 MTCO2P27-201ENST00000420740 428 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0□□□□□ -2.41
CCDC112Q8NEF3 HMGN2P32-201ENST00000444648 269 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0□□□□□ -2.41
CCDC112Q8NEF3 AC069113.3-201ENST00000521019 150 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 MIR4804-201ENST00000581683 73 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 DISC2.1-201ENST00000612827 205 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 AC067863.3-201ENST00000624172 122 ntBASIC0□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 RNU6-815P-201ENST00000384080 113 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 MT-TN-201ENST00000387400 73 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 MTCO3P40-201ENST00000392516 676 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 MIR190B-201ENST00000401119 79 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 RNU6-908P-201ENST00000410160 94 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 SEPT14P3-201ENST00000439401 183 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 AL732372.2-207ENST00000445840 183 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 SEPT14P2-201ENST00000453405 183 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 RNU7-56P-201ENST00000458744 62 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 U8.22-201ENST00000459141 133 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 SEPT14P4-201ENST00000513445 186 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 RNU2-12P-201ENST00000517216 168 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 FO082796.1-201ENST00000523795 183 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 MIR548AO-201ENST00000579992 96 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 AC121247.2-201ENST00000604776 136 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 AC124864.2-201ENST00000624736 186 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 MTND5P26-201ENST00000426018 1752 ntBASIC-0.01□□□□□ -2.41
CCDC112Q8NEF3 SNORD118-201ENST00000363593 134 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 RNU6-318P-201ENST00000384283 103 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 MIR570-201ENST00000384917 97 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 DEFB108C-201ENST00000400154 252 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 RNU2-54P-201ENST00000410299 190 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 AC015818.7-201ENST00000428754 109 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 AC087499.7-201ENST00000441958 109 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 SNORA40.9-201ENST00000515895 93 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 AC022616.4-201ENST00000522985 181 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 AL512360.1-201ENST00000555346 234 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 AL359880.1-201ENST00000621879 266 ntBASIC-0.02□□□□□ -2.41
CCDC112Q8NEF3 RNU6-874P-201ENST00000362390 105 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 RNU6-879P-201ENST00000364328 108 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 RNU6-131P-201ENST00000391144 107 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 USP9YP30-201ENST00000430729 455 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 RNA5SP94-201ENST00000516917 108 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 AC006362.1-201ENST00000567392 174 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 MIR3942-201ENST00000585264 109 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 AC020891.4-201ENST00000605745 93 ntBASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.03□□□□□ -2.41
CCDC112Q8NEF3 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 SNORD100-201ENST00000408573 76 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 SNORD71-201ENST00000411292 86 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 AC093534.1-201ENST00000504977 132 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 MIR4771-2-201ENST00000577758 74 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 MIR4771-1-201ENST00000582617 74 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 MIR4676-201ENST00000583078 72 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 AL162413.1-201ENST00000603198 110 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 SNORA25.18-201ENST00000607153 114 ntBASIC-0.04□□□□□ -2.42
CCDC112Q8NEF3 SNORA42.1-201ENST00000363515 137 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 SNORD114-9-201ENST00000364370 72 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 RNU6-483P-201ENST00000384088 108 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 RNU6-205P-201ENST00000390858 107 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 RNU6-780P-201ENST00000391030 104 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 RNU6-332P-201ENST00000391193 108 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 AL139396.1-201ENST00000421137 167 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 AC073261.1-201ENST00000429409 121 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 SNORD5.1-201ENST00000458800 75 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 AC019235.1-201ENST00000503847 207 ntBASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.05□□□□□ -2.42
CCDC112Q8NEF3 AC010424.1-201ENST00000506336 297 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms