Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 Y_RNA.389-201ENST00000383924 113 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 RNU6-1323P-201ENST00000384025 107 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 SNORD115-46-201ENST00000390982 71 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 MIR1289-2-201ENST00000408360 111 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 MTCYBP6-201ENST00000441810 138 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 SEPT14P8-201ENST00000508026 178 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC63Q8NA47 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC63Q8NA47 AC090049.2-201ENST00000550377 109 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 AL161670.1-201ENST00000554348 137 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 AC120024.3-201ENST00000603167 156 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 AL513534.2-201ENST00000603836 250 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 MIR376A1-201ENST00000616574 68 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 AC068647.2-201ENST00000637380 353 ntBASIC1.24□□□□□ -2.21
CCDC63Q8NA47 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC63Q8NA47 RNU4-80P-201ENST00000363200 141 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 RNU6-833P-201ENST00000363486 107 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 SNORD113-8-201ENST00000363497 74 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 Y_RNA.158-201ENST00000363651 101 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 Y_RNA.418-201ENST00000384029 102 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 RNU6-101P-201ENST00000410323 104 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC63Q8NA47 PIGPP3-201ENST00000425307 415 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 HSPE1P25-201ENST00000455484 251 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 CYCTP-201ENST00000504253 315 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 RNU6-496P-201ENST00000516145 99 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 Y_RNA.701-201ENST00000516812 110 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 Y_RNA.721-201ENST00000517207 102 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 MIR4680-201ENST00000580906 66 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 MIR3945-201ENST00000581853 98 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 AC027279.3-201ENST00000625055 122 ntBASIC1.23□□□□□ -2.21
CCDC63Q8NA47 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC63Q8NA47 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC63Q8NA47 U8.7-201ENST00000364940 136 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 MIR522-201ENST00000385071 87 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 POLR2KP2-201ENST00000438155 177 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 AC104332.1-201ENST00000440471 797 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 AC114811.1-201ENST00000507207 168 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 RN7SKP88-201ENST00000516847 250 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 RNU6-1137P-201ENST00000517073 99 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC63Q8NA47 AP003357.1-201ENST00000604497 148 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 7SK.8-201ENST00000612110 250 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 7SK.11-201ENST00000615477 250 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 7SK.13-201ENST00000622040 250 ntBASIC1.22□□□□□ -2.21
CCDC63Q8NA47 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC63Q8NA47 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC63Q8NA47 SNORA2.2-201ENST00000365473 135 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.380-201ENST00000365663 111 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.455-201ENST00000384230 98 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.527-201ENST00000384573 102 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 RNU6-1105P-201ENST00000384774 107 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 MIR891A-201ENST00000401237 79 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.602-201ENST00000410535 92 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 RNU2-14P-201ENST00000411053 191 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 ELOCP20-201ENST00000422460 345 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 RNU7-115P-201ENST00000516433 55 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 AC024405.2-202ENST00000532731 184 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 AC113195.1-201ENST00000579952 141 ntBASIC1.21□□□□□ -2.22
CCDC63Q8NA47 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC63Q8NA47 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC63Q8NA47 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 RNU6-1048P-201ENST00000364054 107 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 RNU6-801P-201ENST00000364087 105 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.214-201ENST00000364201 112 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 RNU6-163P-201ENST00000384396 106 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 AC024067.1-201ENST00000426199 223 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 AC117454.1-201ENST00000491120 168 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 RNU6-191P-201ENST00000516295 94 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 RNU6-1153P-201ENST00000516760 105 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 RNU7-116P-201ENST00000516940 62 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 AC127455.1-201ENST00000565496 145 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 MIR4303-201ENST00000581299 66 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 POLR3GP1-201ENST00000594073 261 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
CCDC63Q8NA47 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC63Q8NA47 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.26-201ENST00000362539 101 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.136-201ENST00000363444 102 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 RNU6-806P-201ENST00000365147 105 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.581-201ENST00000391017 97 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 AC136628.3-201ENST00000521868 290 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 AC131281.1-201ENST00000522984 164 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CCDC63Q8NA47 AL356055.1-201ENST00000602528 446 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 MIR548AY-201ENST00000617669 107 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
CCDC63Q8NA47 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC63Q8NA47 snoU2_19.2-201ENST00000363024 80 ntBASIC1.18□□□□□ -2.22
CCDC63Q8NA47 Y_RNA.153-201ENST00000363615 91 ntBASIC1.18□□□□□ -2.22
CCDC63Q8NA47 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
CCDC63Q8NA47 AC117470.1-201ENST00000381974 330 ntBASIC1.18□□□□□ -2.22
CCDC63Q8NA47 SNORA72.4-201ENST00000384174 132 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms