Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-855P-201ENST00000410395 104 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 MTND4P19-201ENST00000446659 478 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 RPS20P10-201ENST00000451209 253 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 AC022616.4-201ENST00000522985 181 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 AC005972.2-201ENST00000604690 348 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 MIR8065-201ENST00000620577 100 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 AL160413.1-201ENST00000622780 310 ntBASIC1.04□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.31-201ENST00000362574 102 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 SNORD81.1-201ENST00000363064 77 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.460-201ENST00000384255 102 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.551-201ENST00000384661 102 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-21P-201ENST00000384710 107 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 MIR653-201ENST00000385279 96 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 AC090049.2-201ENST00000550377 109 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 MIR4781-201ENST00000585250 76 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 DEFB117-201ENST00000602356 141 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 AC120024.3-201ENST00000603167 156 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 AL591926.4-201ENST00000616895 298 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 AC090574.1-201ENST00000623186 233 ntBASIC1.03□□□□□ -2.24
C9orf40Q8IXQ3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 SNORA2.2-201ENST00000365473 135 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 SNORD63-201ENST00000384262 68 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-163P-201ENST00000384396 106 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 MIR891A-201ENST00000401237 79 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 RNU4-30P-201ENST00000410245 143 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 AC024067.1-201ENST00000426199 223 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 CYCTP-201ENST00000504253 315 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 SNORA25.10-201ENST00000515926 124 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-322P-201ENST00000516010 103 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-917P-201ENST00000516294 104 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 PART1_1.1-201ENST00000611761 217 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 AC068647.2-201ENST00000637380 353 ntBASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
C9orf40Q8IXQ3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 RNA5SP327-201ENST00000362494 101 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-833P-201ENST00000363486 107 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 AL451046.2-201ENST00000403074 277 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-130P-201ENST00000411112 103 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 PMCHL1-202ENST00000423102 261 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 PIGPP3-201ENST00000425307 415 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 AC104332.1-201ENST00000440471 797 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 COX6CP14-201ENST00000469580 174 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 HMGN1P7-201ENST00000491722 313 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 AC124312.5-201ENST00000604451 268 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 AC027279.3-201ENST00000625055 122 ntBASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
C9orf40Q8IXQ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
C9orf40Q8IXQ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
C9orf40Q8IXQ3 MTND4P29-201ENST00000503122 1372 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.61-201ENST00000362835 102 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.253-201ENST00000364562 112 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.310-201ENST00000365063 113 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.368-201ENST00000365547 113 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.456-201ENST00000384232 111 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 SNORA72-201ENST00000384339 132 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 SNORD41-201ENST00000386967 70 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.645-201ENST00000391229 102 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 AL590004.1-201ENST00000405321 300 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 AC019288.1-201ENST00000557918 224 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 MIR3145-201ENST00000580727 82 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
C9orf40Q8IXQ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1□□□□□ -2.25
C9orf40Q8IXQ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
C9orf40Q8IXQ3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
C9orf40Q8IXQ3 MIR337-201ENST00000362281 93 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.28-201ENST00000362554 111 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 U8.5-201ENST00000364528 136 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-474P-201ENST00000384243 107 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.535-201ENST00000384612 99 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 MLLT10P1-201ENST00000418346 262 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 U8.19-201ENST00000459095 133 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 HMGN1P10-201ENST00000474557 553 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 AC114811.1-201ENST00000507207 168 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 SEPT14P8-201ENST00000508026 178 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 AC136932.1-201ENST00000574771 208 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 MIR4762-201ENST00000585261 75 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 SNORD113-5-201ENST00000607261 78 ntBASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.128-201ENST00000363391 112 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 SNORA63.7-201ENST00000365579 123 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.394-201ENST00000383942 103 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 MIR526A1-201ENST00000384897 85 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms