Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU1-148P-201ENST00000384472 162 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 SNORA26-201ENST00000391286 122 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 HMGN2P35-201ENST00000412164 270 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 RPS27P1-201ENST00000450552 247 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 SNORD77.4-201ENST00000516158 81 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-1299P-201ENST00000516316 100 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-197P-201ENST00000516680 100 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 MIR4524B-201ENST00000581569 115 ntBASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
RUFY4Q6ZNE9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-1138P-201ENST00000365359 106 ntBASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 SNORA8-201ENST00000384574 139 ntBASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.568-201ENST00000384742 113 ntBASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 MIR27B-201ENST00000385129 97 ntBASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 HMGN1P7-201ENST00000491722 313 ntBASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 AP002004.2-201ENST00000531656 154 ntBASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RUFY4Q6ZNE9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-862P-201ENST00000362804 105 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-597P-201ENST00000365620 102 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.393-201ENST00000383936 102 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-484P-201ENST00000384016 107 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.497-201ENST00000384447 98 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 SNORA19-201ENST00000384737 128 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 MIR378D2-201ENST00000580636 98 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 AC087685.1-201ENST00000587507 141 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 AL049861.1-201ENST00000603130 150 ntBASIC2.81□□□□□ -1.96
RUFY4Q6ZNE9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 SNORD114-30-201ENST00000364448 72 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 RNU1-91P-201ENST00000364746 163 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-1080P-201ENST00000383982 107 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 MIR513C-201ENST00000401352 84 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 SNORA3.2-201ENST00000408221 125 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.622-201ENST00000411091 108 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 OR9P1P-201ENST00000496431 281 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 AC097639.2-201ENST00000603159 172 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 ZNF658B-202ENST00000615961 3375 ntBASIC2.8□□□□□ -1.96
RUFY4Q6ZNE9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-199P-201ENST00000362954 107 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 MIR569-201ENST00000385228 96 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 RNA5SP425-201ENST00000410336 112 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 RPL30P13-201ENST00000418873 348 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 AC233266.1-201ENST00000454518 96 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 AL163195.1-201ENST00000496941 348 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 AL031274.2-201ENST00000599419 203 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 AC242852.1-201ENST00000612151 96 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 U4.3-201ENST00000621047 82 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 AC244015.1-201ENST00000622301 99 ntBASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RUFY4Q6ZNE9 RNU4-11P-201ENST00000365287 132 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 AC099677.2-201ENST00000436385 175 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 snoU13.15-201ENST00000459407 104 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 RNU6-1291P-201ENST00000516591 104 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 SNORA31.15-201ENST00000516771 132 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 MIR6844-201ENST00000637122 62 ntBASIC2.78□□□□□ -1.96
RUFY4Q6ZNE9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 SNORA33-201ENST00000363664 130 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 Y_RNA.253-201ENST00000364562 112 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 Y_RNA.267-201ENST00000364679 109 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 RNU6-131P-201ENST00000391144 107 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 SNORA75.5-201ENST00000391291 81 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 AC069257.2-201ENST00000441819 155 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 AC112693.2-201ENST00000556538 232 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
RUFY4Q6ZNE9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 SNORD37.2-201ENST00000391075 66 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 RNA5SP465-201ENST00000391195 109 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 MIR548I2-201ENST00000408348 149 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 RNU2-70P-201ENST00000410718 179 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 AC245047.4-201ENST00000433189 144 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 RPS12P2-201ENST00000439728 269 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 AL049830.1-201ENST00000468034 425 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 RNU7-149P-201ENST00000516739 59 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 RNU7-28P-201ENST00000516759 62 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms