Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 MIR522-201ENST00000385071 87 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 MIR516B2-201ENST00000385190 85 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 MIR136-201ENST00000385207 82 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.646-201ENST00000410980 101 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 SNORA25.10-201ENST00000515926 124 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 RNU7-4P-201ENST00000516961 62 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 AC136628.3-201ENST00000521868 290 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 AP003716.2-201ENST00000528260 108 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 AC005176.2-201ENST00000596933 147 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 SEPT14P17-201ENST00000617978 177 ntBASIC0.65□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.172-201ENST00000363765 102 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 RNU6-310P-201ENST00000384655 107 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 MIR15B-201ENST00000385045 98 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 SNORD78.2-201ENST00000391076 69 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 RNU6-1199P-201ENST00000411249 104 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 CHEK2P4-201ENST00000450340 246 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 AC144568.1-201ENST00000520139 137 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 AC133485.1-201ENST00000567176 124 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 AC138907.6-201ENST00000568401 126 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 MIR5000-201ENST00000577717 103 ntBASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.160-201ENST00000363677 92 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 RNU6-324P-201ENST00000363957 106 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.796-201ENST00000364268 102 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.799-201ENST00000364992 102 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 SNORD14.1-201ENST00000365609 90 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 RNU6-20P-201ENST00000384106 107 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 MIR605-201ENST00000385078 83 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 MIR1185-1-201ENST00000408598 86 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 PDCL2P1-201ENST00000419302 352 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 RNU7-41P-201ENST00000515917 61 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 RNU6-155P-201ENST00000516347 100 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 RNU6-1012P-201ENST00000516606 109 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 TPTEP1-208ENST00000636884 213 ntBASIC0.63□□□□□ -2.31
TRIM40Q6P9F5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 RNU6-1084P-201ENST00000362498 107 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 RNU6-626P-201ENST00000363354 107 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 RNU6-890P-201ENST00000384121 107 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.446-201ENST00000384178 104 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 MLLT10P1-201ENST00000418346 262 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 RPL30P15-201ENST00000457129 321 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 U8.19-201ENST00000459095 133 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 PRDX4P1-201ENST00000507189 574 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 RNU6-436P-201ENST00000516171 114 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 RNU7-43P-201ENST00000516554 64 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 MIR4764-201ENST00000580680 88 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 MIR5690-201ENST00000583739 73 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 AC131055.1-201ENST00000584626 316 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 AC005972.2-201ENST00000604690 348 ntBASIC0.62□□□□□ -2.31
TRIM40Q6P9F5 SNORA25.3-201ENST00000363205 127 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 RNA5SP48-201ENST00000363969 126 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 snoU2-30.1-201ENST00000365012 70 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 SNORA72-201ENST00000384339 132 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 HMGN2P32-201ENST00000444648 269 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 RNU7-169P-201ENST00000459456 61 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 snoU13.18-201ENST00000459483 104 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 RNU6-470P-201ENST00000515954 104 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 SNORA18.7-201ENST00000516910 131 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 AC109810.1-201ENST00000534066 224 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 AL353765.1-201ENST00000605514 183 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 AC022709.1-201ENST00000615967 87 ntBASIC0.61□□□□□ -2.31
TRIM40Q6P9F5 RNY3P11-201ENST00000364153 102 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.230-201ENST00000364348 109 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 SNORD81.2-201ENST00000365153 76 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 RNU6-1297P-201ENST00000384415 104 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 RNU6-131P-201ENST00000391144 107 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 RNU6-192P-201ENST00000391253 100 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.605-201ENST00000410577 105 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 AL390729.2-201ENST00000416137 156 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 RN7SKP164-201ENST00000516138 266 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 RNU6-966P-201ENST00000516479 104 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 RNU6-911P-201ENST00000516523 104 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 MTND4LP26-201ENST00000518144 282 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 AC023827.1-201ENST00000569247 97 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 MIR4659A-201ENST00000580269 81 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 AC104465.1-201ENST00000611365 139 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 AC011476.5-201ENST00000615594 130 ntBASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.6□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.146-201ENST00000363549 102 ntBASIC0.59□□□□□ -2.31
TRIM40Q6P9F5 SNORD50B-201ENST00000364995 70 ntBASIC0.59□□□□□ -2.31
TRIM40Q6P9F5 Y_RNA.354-201ENST00000365448 111 ntBASIC0.59□□□□□ -2.31
TRIM40Q6P9F5 MIR628-201ENST00000385229 95 ntBASIC0.59□□□□□ -2.31
TRIM40Q6P9F5 MT-TL1-201ENST00000386347 75 ntBASIC0.59□□□□□ -2.31
TRIM40Q6P9F5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms