Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.21□□□□□ -2.22
ZNF544Q6NX49 AL358944.1-201ENST00000528537 144 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 AP003733.2-201ENST00000529409 171 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.21□□□□□ -2.22
ZNF544Q6NX49 RPL21P9-201ENST00000556149 474 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 DEFB117-201ENST00000602356 141 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 AC004832.4-201ENST00000608952 331 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
ZNF544Q6NX49 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.2□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.310-201ENST00000365063 113 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 RNU6-290P-201ENST00000365212 101 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.418-201ENST00000384029 102 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AL161935.2-201ENST00000414627 60 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 RPL21P38-201ENST00000418090 167 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AL358176.2-201ENST00000425769 204 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AL135790.2-201ENST00000437701 267 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 POLR2KP2-201ENST00000438155 177 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 MTND4LP30-201ENST00000454092 297 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 snoU13.27-201ENST00000459278 104 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AC136443.5-201ENST00000603741 370 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AL360085.1-201ENST00000604713 532 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AL353621.2-201ENST00000605340 133 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AL157834.3-201ENST00000615543 103 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 MIR8054-201ENST00000620877 86 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 AC100821.1-201ENST00000523153 2479 ntBASIC1.2□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.64-201ENST00000362845 102 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.172-201ENST00000363765 102 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 SNORA4.2-201ENST00000365313 147 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RNU6-326P-201ENST00000365480 107 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 SNORD116-13-201ENST00000384408 92 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.541-201ENST00000384640 113 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RNU6-376P-201ENST00000384731 106 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 SNORA12.1-201ENST00000390873 148 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RNU6-1248P-201ENST00000391096 64 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RNU2-7P-201ENST00000410794 178 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RNA5SP247-201ENST00000411181 105 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC024067.1-201ENST00000426199 223 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC245047.3-201ENST00000429428 127 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RPS20P10-201ENST00000451209 253 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC091021.1-201ENST00000468051 388 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC098869.1-201ENST00000481627 292 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 RNY3P15-201ENST00000516297 97 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AC008737.2-201ENST00000599446 118 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
ZNF544Q6NX49 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.84-201ENST00000363011 104 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.162-201ENST00000363683 102 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 RNU6-1323P-201ENST00000384025 107 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.574-201ENST00000384766 95 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 MIR215-201ENST00000384858 110 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 RNA5SP511-201ENST00000410487 115 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.602-201ENST00000410535 92 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF544Q6NX49 MTND2P23-201ENST00000422990 651 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 JTBP1-201ENST00000441314 247 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 DYNLT3P2-201ENST00000442517 295 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 RNU6-191P-201ENST00000516295 94 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 RNU6-63P-201ENST00000516690 95 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 AP002004.2-201ENST00000531656 154 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 MIR4422-201ENST00000581938 83 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 AL162424.1-201ENST00000602325 221 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 AC005972.2-201ENST00000604690 348 ntBASIC1.18□□□□□ -2.22
ZNF544Q6NX49 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF544Q6NX49 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF544Q6NX49 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF544Q6NX49 RNU4-80P-201ENST00000363200 141 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.133-201ENST00000363428 110 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.569-201ENST00000384749 103 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU6-1031P-201ENST00000384773 107 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU6-1105P-201ENST00000384774 107 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU6-440P-201ENST00000390882 105 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RN7SKP200-201ENST00000410564 320 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU6-1203P-201ENST00000410703 110 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 MTCO1P5-201ENST00000433573 344 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RPS4XP11-201ENST00000446897 772 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 MTATP8P1-201ENST00000467115 207 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 AC005908.1-201ENST00000468701 347 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU6-327P-201ENST00000516270 127 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU6-1045P-201ENST00000516321 107 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU7-28P-201ENST00000516759 62 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 RNU6-1096P-201ENST00000517089 102 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 MIR4709-201ENST00000577272 72 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 MIR3145-201ENST00000580727 82 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 AL929325.1-201ENST00000603096 117 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 MIR8074-201ENST00000615081 81 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 AL078604.3-201ENST00000615580 211 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 MIR8062-201ENST00000621515 85 ntBASIC1.17□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.341-201ENST00000365341 102 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 SNORA72-201ENST00000384339 132 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
ZNF544Q6NX49 RNU1-78P-201ENST00000391248 165 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms