Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 AC005972.2-201ENST00000604690 348 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.29□□□□□ -2.2
KRT39Q6A163 Y_RNA.148-201ENST00000363557 117 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 RNU4-50P-201ENST00000364361 141 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 Y_RNA.310-201ENST00000365063 113 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 MIR526A1-201ENST00000384897 85 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 Y_RNA.621-201ENST00000411065 96 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 U8.20-201ENST00000459445 131 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 CYCTP-201ENST00000504253 315 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 RNU7-110P-201ENST00000516891 62 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.28□□□□□ -2.2
KRT39Q6A163 MIR4762-201ENST00000585261 75 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 AC011373.1-201ENST00000607270 237 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 AC090971.5-201ENST00000621102 293 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 AL160413.1-201ENST00000622780 310 ntBASIC1.28□□□□□ -2.2
KRT39Q6A163 SNORD68-201ENST00000363214 84 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 RNU6-833P-201ENST00000363486 107 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 Y_RNA.143-201ENST00000363520 106 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 Y_RNA.253-201ENST00000364562 112 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 SNORD14.1-201ENST00000365609 90 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 Y_RNA.445-201ENST00000384168 102 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 Y_RNA.645-201ENST00000391229 102 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 RNU6-710P-201ENST00000410424 105 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 RPL23AP36-201ENST00000413895 458 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 PIGPP3-201ENST00000425307 415 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 AC104332.1-201ENST00000440471 797 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 RNU6-1153P-201ENST00000516760 105 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 AC136932.1-201ENST00000574771 208 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 MIR3145-201ENST00000580727 82 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.27□□□□□ -2.21
KRT39Q6A163 AL356055.1-201ENST00000602528 446 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 GHRLOS.1-201ENST00000610995 70 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
KRT39Q6A163 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
KRT39Q6A163 AL391987.6-201ENST00000305671 199 ntBASIC1.26□□□□□ -2.21
KRT39Q6A163 SNORA2.2-201ENST00000365473 135 ntBASIC1.26□□□□□ -2.21
KRT39Q6A163 Y_RNA.368-201ENST00000365547 113 ntBASIC1.26□□□□□ -2.21
KRT39Q6A163 MIR891A-201ENST00000401237 79 ntBASIC1.26□□□□□ -2.21
KRT39Q6A163 Y_RNA.713-201ENST00000517013 96 ntBASIC1.26□□□□□ -2.21
KRT39Q6A163 AC022616.4-201ENST00000522985 181 ntBASIC1.26□□□□□ -2.21
KRT39Q6A163 AC027279.3-201ENST00000625055 122 ntBASIC1.26□□□□□ -2.21
KRT39Q6A163 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
KRT39Q6A163 Y_RNA.138-201ENST00000363462 102 ntBASIC1.25□□□□□ -2.21
KRT39Q6A163 Y_RNA.286-201ENST00000364813 102 ntBASIC1.25□□□□□ -2.21
KRT39Q6A163 RNU6-474P-201ENST00000384243 107 ntBASIC1.25□□□□□ -2.21
KRT39Q6A163 SNORA72-201ENST00000384339 132 ntBASIC1.25□□□□□ -2.21
KRT39Q6A163 RNU6-1105P-201ENST00000384774 107 ntBASIC1.25□□□□□ -2.21
KRT39Q6A163 AL451046.2-201ENST00000403074 277 ntBASIC1.25□□□□□ -2.21
KRT39Q6A163 AC114811.1-201ENST00000507207 168 ntBASIC1.25□□□□□ -2.21
KRT39Q6A163 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRT39Q6A163 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.25□□□□□ -2.21
KRT39Q6A163 Y_RNA.11-201ENST00000362375 109 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 Y_RNA.341-201ENST00000365341 102 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 Y_RNA.460-201ENST00000384255 102 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 RNU6-163P-201ENST00000384396 106 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 MIR522-201ENST00000385071 87 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 RNU6-1046P-201ENST00000516538 107 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.24□□□□□ -2.21
KRT39Q6A163 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.24□□□□□ -2.21
KRT39Q6A163 AC044792.1-201ENST00000593294 196 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 snoU13.31-201ENST00000607291 104 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 AC090574.1-201ENST00000623186 233 ntBASIC1.24□□□□□ -2.21
KRT39Q6A163 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRT39Q6A163 RNU6-1323P-201ENST00000384025 107 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 Y_RNA.456-201ENST00000384232 111 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 RNU6-21P-201ENST00000384710 107 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 HMGN1P10-201ENST00000474557 553 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 RNU6-322P-201ENST00000516010 103 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 Y_RNA.701-201ENST00000516812 110 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 RAC1P9-201ENST00000604990 392 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.23□□□□□ -2.21
KRT39Q6A163 AC099654.10-201ENST00000640395 161 ntBASIC1.23□□□□□ -2.21
KRT39Q6A163 RNU6-450P-201ENST00000364654 107 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 Y_RNA.338-201ENST00000365320 114 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 Y_RNA.424-201ENST00000384063 103 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 MTCYBP6-201ENST00000441810 138 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 RNU6-397P-201ENST00000516226 104 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 Y_RNA.715-201ENST00000517082 110 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 MIR4300-201ENST00000581016 96 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 AC104695.3-201ENST00000604052 296 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
KRT39Q6A163 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
KRT39Q6A163 Y_RNA.28-201ENST00000362554 111 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 Y_RNA.216-201ENST00000364205 93 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 Y_RNA.336-201ENST00000365307 109 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 Y_RNA.383-201ENST00000383855 97 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 RNU6-102P-201ENST00000384485 104 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 RNU6-823P-201ENST00000391042 103 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 RNU6-1054P-201ENST00000411293 104 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 MTCO2P12-201ENST00000427426 682 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 Y_RNA.631-201ENST00000459607 101 ntBASIC1.21□□□□□ -2.22
KRT39Q6A163 HMGN1P7-201ENST00000491722 313 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 244.1 ms