Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 SNORD116-13-201ENST00000384408 92 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 MT-TT-201ENST00000387460 66 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RNA5SP467-201ENST00000391274 118 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 MIR873-201ENST00000401120 77 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 AL117342.1-201ENST00000404861 406 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 MIR548I2-201ENST00000408348 149 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 HSPE1P21-201ENST00000438283 308 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 AL353689.1-201ENST00000438895 199 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RPL23AP7-203ENST00000449021 469 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 AC245047.8-201ENST00000456455 284 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 SNORA70.12-201ENST00000516084 153 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 RNU6-63P-201ENST00000516690 95 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 MIR219B-201ENST00000637023 88 ntBASIC2.34□□□□□ -2.03
SLC44A4Q53GD3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNU6-275P-201ENST00000364910 107 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNU6-449P-201ENST00000383914 107 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNU6-578P-201ENST00000390980 103 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNU6-383P-201ENST00000410864 94 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RPS15AP28-201ENST00000435088 386 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 AC099677.2-201ENST00000436385 175 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RPS26P55-201ENST00000471178 356 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNA5SP20-201ENST00000515976 84 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNA5SP272-201ENST00000516095 111 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 SNORA31.25-201ENST00000517242 134 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 MIR4744-201ENST00000581563 82 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 MIR4438-201ENST00000585271 93 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 AC068647.2-201ENST00000637380 353 ntBASIC2.33□□□□□ -2.04
SLC44A4Q53GD3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 RNU6-131P-201ENST00000391144 107 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 AL355497.1-201ENST00000406262 551 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 RN7SKP164-201ENST00000516138 266 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 SNORD116-25-201ENST00000516517 92 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 MIR3684-201ENST00000579779 74 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 AP001485.1-201ENST00000604799 199 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 AC092881.1-201ENST00000638218 2733 ntBASIC2.32□□□□□ -2.04
SLC44A4Q53GD3 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 RNU6-151P-201ENST00000364158 107 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 SNORD113-1-201ENST00000365321 69 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 SNORD50.2-201ENST00000365465 70 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 SNORA11.4-201ENST00000408823 129 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 AC018634.1-201ENST00000437554 401 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.31□□□□□ -2.04
SLC44A4Q53GD3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 RNU1-96P-201ENST00000364163 162 ntBASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 RNU6-561P-201ENST00000516222 102 ntBASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 RNU7-115P-201ENST00000516433 55 ntBASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 AC109810.1-201ENST00000534066 224 ntBASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 AL353149.1-201ENST00000610667 244 ntBASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 MTND1P7-201ENST00000632801 297 ntBASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SLC44A4Q53GD3 CENPCP1-201ENST00000533085 2578 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNU1-22P-201ENST00000363334 158 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNU6-103P-201ENST00000363686 107 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNU6-271P-201ENST00000363858 105 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 Y_RNA.229-201ENST00000364347 113 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNU6-136P-201ENST00000384663 107 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 MIR526A2-201ENST00000390198 65 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNU6-239P-201ENST00000390990 99 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 SNORA36B-201ENST00000410438 131 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 EBAG9P1-201ENST00000418955 543 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 AC097462.1-201ENST00000514125 324 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNVU1-2-201ENST00000516326 135 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 RNU7-128P-201ENST00000517247 62 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 MIR4724-201ENST00000579485 89 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 MIR4431-201ENST00000579990 94 ntBASIC2.29□□□□□ -2.04
SLC44A4Q53GD3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms