Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU6-131P-201ENST00000391144 107 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
ZNF404Q494X3 RNU6-613P-201ENST00000410412 108 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 RNU6-1148P-201ENST00000410992 104 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 AC092989.1-201ENST00000481235 277 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 AC105313.1-201ENST00000509121 353 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 SNORA25.10-201ENST00000515926 124 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 RNU6-506P-201ENST00000516553 94 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 RNU2-12P-201ENST00000517216 168 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 AC104695.3-201ENST00000604052 296 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 AC004467.1-201ENST00000615678 330 ntBASIC0.24□□□□□ -2.37
ZNF404Q494X3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
ZNF404Q494X3 MIRLET7D-201ENST00000362263 87 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 SNORD50B-201ENST00000364995 70 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 Y_RNA.402-201ENST00000383972 102 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 Y_RNA.473-201ENST00000384333 102 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 SNORD116-1-201ENST00000384335 95 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 RNY1P4-201ENST00000384595 115 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 MIR573-201ENST00000384964 99 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 AC074085.1-201ENST00000413598 418 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 AC026782.1-201ENST00000512952 449 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 RNU6-408P-201ENST00000515910 100 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 MIR2115-201ENST00000516657 100 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 MTND2P38-201ENST00000522536 667 ntBASIC0.23□□□□□ -2.37
ZNF404Q494X3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.23□□□□□ -2.37
ZNF404Q494X3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 AL031003.1-201ENST00000404229 172 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.22□□□□□ -2.37
ZNF404Q494X3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 MTND3P21-201ENST00000433774 331 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 U8.19-201ENST00000459095 133 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 RNU6-329P-201ENST00000459618 107 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 RNU6-1016P-201ENST00000516689 94 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 AC012433.1-201ENST00000588916 398 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 AC006380.1-201ENST00000603598 186 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 AC091925.1-201ENST00000623204 462 ntBASIC0.22□□□□□ -2.37
ZNF404Q494X3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.22□□□□□ -2.37
ZNF404Q494X3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.21□□□□□ -2.38
ZNF404Q494X3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 Y_RNA.301-201ENST00000364990 103 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 Y_RNA.559-201ENST00000384686 107 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 Y_RNA.594-201ENST00000410373 140 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 MTND2P22-201ENST00000444325 1033 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 MTND5P5-201ENST00000503764 376 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.21□□□□□ -2.38
ZNF404Q494X3 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 SNORD28B-201ENST00000390993 75 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 RNA5SP118-201ENST00000410385 109 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 SNRPGP10-201ENST00000432323 225 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 MTND1P29-201ENST00000448112 647 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 AC026407.1-201ENST00000518369 204 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.2□□□□□ -2.38
ZNF404Q494X3 AC245505.1-201ENST00000556398 224 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 MIR548AR-201ENST00000582191 57 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 AC018638.8-201ENST00000588755 281 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 AC015726.2-201ENST00000620112 122 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 AC022079.1-201ENST00000621546 602 ntBASIC0.2□□□□□ -2.38
ZNF404Q494X3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 RNU6-593P-201ENST00000364716 112 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 RNU6-396P-201ENST00000365369 105 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 RNU6-1050P-201ENST00000410388 107 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 RNU2-61P-201ENST00000411069 191 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 Y_RNA.670-201ENST00000516255 105 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 Y_RNA.682-201ENST00000516457 100 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 MIR2355-201ENST00000517199 87 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 AL355375.2-201ENST00000574825 175 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 AC005972.2-201ENST00000604690 348 ntBASIC0.19□□□□□ -2.38
ZNF404Q494X3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.19□□□□□ -2.38
ZNF404Q494X3 MIR18A-201ENST00000362310 71 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 RNU6-369P-201ENST00000362515 102 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 RNU6-961P-201ENST00000363893 105 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 SNORD14E-201ENST00000364009 85 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 SNORA72-201ENST00000384339 132 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 SNORD38C-201ENST00000384381 69 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 MIR520F-201ENST00000384824 87 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 MIR193B-201ENST00000384907 83 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 MIR181A1-201ENST00000385026 110 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 MIR520H-201ENST00000385126 88 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 RNU2-70P-201ENST00000410718 179 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.18□□□□□ -2.38
ZNF404Q494X3 CHEK2P4-201ENST00000450340 246 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 AC098826.2-201ENST00000452011 651 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 RNU4-49P-201ENST00000516080 140 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 AC055872.1-201ENST00000570978 278 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 AL162730.1-201ENST00000605734 292 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 AC015540.1-201ENST00000615828 501 ntBASIC0.18□□□□□ -2.38
ZNF404Q494X3 Y_RNA.89-201ENST00000363031 102 ntBASIC0.17□□□□□ -2.38
ZNF404Q494X3 SNORD114-26-201ENST00000363543 72 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms