Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 AC108706.1-201ENST00000611053 297 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 AC091925.1-201ENST00000623204 462 ntBASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
LRIT3Q3SXY7 RNU6-490P-201ENST00000362985 107 ntBASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 Y_RNA.387-201ENST00000383918 102 ntBASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 U2.1-201ENST00000618978 145 ntBASIC1.03□□□□□ -2.24
LRIT3Q3SXY7 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.25
LRIT3Q3SXY7 RNU6-324P-201ENST00000363957 106 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 RNU6-163P-201ENST00000384396 106 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 MIR891A-201ENST00000401237 79 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 AL031003.1-201ENST00000404229 172 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 RNU2-54P-201ENST00000410299 190 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 RNA5SP511-201ENST00000410487 115 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 AL354751.2-201ENST00000415471 210 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 AL162725.1-201ENST00000435405 301 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 SNORA31.2-201ENST00000516019 134 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 RNU6-917P-201ENST00000516294 104 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 RNU6-911P-201ENST00000516523 104 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 RNU6-1337P-201ENST00000516525 95 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LRIT3Q3SXY7 RNY3P11-201ENST00000364153 102 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 SNORD41-201ENST00000386967 70 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 MRPS18CP6-201ENST00000423587 223 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 AC104332.1-201ENST00000440471 797 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 Z98949.2-201ENST00000440996 144 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 CYCTP-201ENST00000504253 315 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 AL117336.2-201ENST00000602435 335 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 AC240442.1-201ENST00000616055 283 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 AC027335.2-201ENST00000624030 375 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 MTND4LP32-201ENST00000636111 270 ntBASIC1.01□□□□□ -2.25
LRIT3Q3SXY7 MIRLET7C-201ENST00000362160 84 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 SNORD68-201ENST00000363214 84 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 RNU6-626P-201ENST00000363354 107 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 RNU6-833P-201ENST00000363486 107 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 RNU6-20P-201ENST00000384106 107 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 RNU6-1054P-201ENST00000411293 104 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 RBMX2P4-201ENST00000441256 376 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 AC048334.1-201ENST00000477975 159 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 RNU6-155P-201ENST00000516347 100 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 RNU6-1012P-201ENST00000516606 109 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 AC055872.1-201ENST00000570978 278 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 MIR4659A-201ENST00000580269 81 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 UBE2V2P2-201ENST00000587677 504 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 AC120024.3-201ENST00000603167 156 ntBASIC1□□□□□ -2.25
LRIT3Q3SXY7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1□□□□□ -2.25
LRIT3Q3SXY7 RNU4-79P-201ENST00000362764 141 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.101-201ENST00000363154 102 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.471-201ENST00000384312 102 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 RNY4P36-201ENST00000391116 96 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 LINC01399-202ENST00000458450 244 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 AC022616.4-201ENST00000522985 181 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 AC027279.3-201ENST00000625055 122 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 MIR1302-1-201ENST00000637932 143 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 MIR6086-201ENST00000638065 55 ntBASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.27-201ENST00000362540 103 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.230-201ENST00000364348 109 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 RNU6-1040P-201ENST00000383974 107 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.428-201ENST00000384078 102 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 Y_RNA.446-201ENST00000384178 104 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 MIR1197-201ENST00000408818 88 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 RNA5SP193-201ENST00000410353 107 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 MTCO2P27-201ENST00000420740 428 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 AC245047.7-201ENST00000440265 293 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 RPEP5-201ENST00000441137 268 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 RNU6-699P-201ENST00000517081 110 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 RNU6-1116P-201ENST00000517269 99 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 AC133485.1-201ENST00000567176 124 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 AC138907.6-201ENST00000568401 126 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 VN1R91P-201ENST00000594377 169 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 AC011476.5-201ENST00000615594 130 ntBASIC0.98□□□□□ -2.25
LRIT3Q3SXY7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
LRIT3Q3SXY7 MIR559-201ENST00000385188 96 ntBASIC0.97□□□□□ -2.25
LRIT3Q3SXY7 PIGPP3-201ENST00000425307 415 ntBASIC0.97□□□□□ -2.25
LRIT3Q3SXY7 AC098934.3-201ENST00000430450 190 ntBASIC0.97□□□□□ -2.25
LRIT3Q3SXY7 CHEK2P4-201ENST00000450340 246 ntBASIC0.97□□□□□ -2.25
LRIT3Q3SXY7 MIR4711-201ENST00000578274 70 ntBASIC0.97□□□□□ -2.25
LRIT3Q3SXY7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.97□□□□□ -2.25
LRIT3Q3SXY7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 SNORD12-201ENST00000391002 90 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms