Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 Y_RNA.154-201ENST00000363624 102 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 Y_RNA.263-201ENST00000364659 114 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 snoU2-30.1-201ENST00000365012 70 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 RNY3P1-201ENST00000365085 102 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 Y_RNA.341-201ENST00000365341 102 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 RNY3-201ENST00000365484 102 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 MIR136-201ENST00000385207 82 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 RNU6-131P-201ENST00000391144 107 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 MTND1P14-201ENST00000427400 950 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 SNRPGP10-201ENST00000432323 225 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 AL160004.2-201ENST00000432935 350 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 RNU7-95P-201ENST00000459222 64 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 RNU7-21P-201ENST00000459430 62 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 AC093852.1-201ENST00000503587 266 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 RNU7-110P-201ENST00000516891 62 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 AC090142.3-201ENST00000519012 385 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN1BQ07699 RPS29P30-201ENST00000600975 111 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 PRELID3BP2-201ENST00000605362 201 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 AL138825.1-201ENST00000618587 192 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 AC112487.2-201ENST00000637950 304 ntBASIC1.01□□□□□ -2.25
SCN1BQ07699 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1□□□□□ -2.25
SCN1BQ07699 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
SCN1BQ07699 RPL23AP36-201ENST00000413895 458 ntBASIC1□□□□□ -2.25
SCN1BQ07699 AC236972.2-201ENST00000434979 310 ntBASIC1□□□□□ -2.25
SCN1BQ07699 SNORA74.3-201ENST00000517108 154 ntBASIC1□□□□□ -2.25
SCN1BQ07699 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1□□□□□ -2.25
SCN1BQ07699 AC136932.1-201ENST00000574771 208 ntBASIC1□□□□□ -2.25
SCN1BQ07699 AL121655.1-201ENST00000605811 308 ntBASIC1□□□□□ -2.25
SCN1BQ07699 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
SCN1BQ07699 AC011373.1-201ENST00000607270 237 ntBASIC1□□□□□ -2.25
SCN1BQ07699 AL353770.2-201ENST00000620024 78 ntBASIC1□□□□□ -2.25
SCN1BQ07699 AL606534.2-204ENST00000635008 178 ntBASIC1□□□□□ -2.25
SCN1BQ07699 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SCN1BQ07699 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SCN1BQ07699 SNORD81.1-201ENST00000363064 77 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 Y_RNA.252-201ENST00000364556 101 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 Y_RNA.310-201ENST00000365063 113 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 Y_RNA.338-201ENST00000365320 114 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 RNU1-115P-201ENST00000365329 160 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 SNORD14.1-201ENST00000365609 90 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 AC117470.1-201ENST00000381974 330 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 Y_RNA.458-201ENST00000384240 102 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 Y_RNA.462-201ENST00000384268 102 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 HMGN2P32-201ENST00000444648 269 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 MTND5P20-201ENST00000448677 143 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 U8.19-201ENST00000459095 133 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 RNU7-90P-201ENST00000459216 62 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 SNORA18.7-201ENST00000516910 131 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 MIR3145-201ENST00000580727 82 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 MIR548S-201ENST00000581352 82 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 AL020996.3-201ENST00000606617 222 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 SNORD58B-201ENST00000607313 66 ntBASIC0.99□□□□□ -2.25
SCN1BQ07699 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
SCN1BQ07699 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR378A-201ENST00000362177 66 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 Y_RNA.5-201ENST00000362334 102 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 Y_RNA.80-201ENST00000362996 102 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 SNORD50B-201ENST00000364995 70 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 RNU6-1323P-201ENST00000384025 107 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 Y_RNA.485-201ENST00000384395 102 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR520C-201ENST00000385005 87 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR15B-201ENST00000385045 98 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR942-201ENST00000401111 86 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 RNU4-30P-201ENST00000410245 143 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 BTF3P4-201ENST00000418852 495 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 AF228730.4-201ENST00000421457 183 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.98□□□□□ -2.25
SCN1BQ07699 RNU7-41P-201ENST00000515917 61 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 RNU6-237P-201ENST00000515985 71 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 RNU6-976P-201ENST00000516086 111 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 Y_RNA.702-201ENST00000516843 96 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.98□□□□□ -2.25
SCN1BQ07699 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 POLR3GP1-201ENST00000594073 261 ntBASIC0.98□□□□□ -2.25
SCN1BQ07699 MIR103A2-201ENST00000362154 78 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 RNA5SP264-201ENST00000363115 107 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 SNORA25.3-201ENST00000363205 127 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 Y_RNA.368-201ENST00000365547 113 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 Y_RNA.456-201ENST00000384232 111 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 AC024067.1-201ENST00000426199 223 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.97□□□□□ -2.25
SCN1BQ07699 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 SNORA40.14-201ENST00000516543 86 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 RNU7-116P-201ENST00000516940 62 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 Y_RNA.714-201ENST00000517065 90 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 AC024405.2-202ENST00000532731 184 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 MIR4801-201ENST00000582704 82 ntBASIC0.97□□□□□ -2.25
SCN1BQ07699 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
SCN1BQ07699 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SCN1BQ07699 Y_RNA.315-201ENST00000365117 102 ntBASIC0.96□□□□□ -2.26
SCN1BQ07699 Y_RNA.439-201ENST00000384119 94 ntBASIC0.96□□□□□ -2.26
SCN1BQ07699 RNU6-937P-201ENST00000384325 106 ntBASIC0.96□□□□□ -2.26
SCN1BQ07699 RNU6-21P-201ENST00000384710 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms