Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC010332.2-201ENST00000613083 1904 ntBASIC-0.32□□□□□ -2.46
CCL20P78556 RNY1P16-201ENST00000363063 111 ntBASIC-0.32□□□□□ -2.46
CCL20P78556 MIR125B2-201ENST00000385128 89 ntBASIC-0.32□□□□□ -2.46
CCL20P78556 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.32□□□□□ -2.46
CCL20P78556 SNORA40.9-201ENST00000515895 93 ntBASIC-0.32□□□□□ -2.46
CCL20P78556 RNU6-830P-201ENST00000516353 107 ntBASIC-0.32□□□□□ -2.46
CCL20P78556 Z69908.1-201ENST00000622603 247 ntBASIC-0.32□□□□□ -2.46
CCL20P78556 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.32□□□□□ -2.46
CCL20P78556 RNA5SP432-201ENST00000362480 116 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 AC005042.3-201ENST00000453230 174 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.33□□□□□ -2.46
CCL20P78556 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 RNU6-448P-201ENST00000517052 107 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 RNU7-156P-201ENST00000517214 74 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.33□□□□□ -2.46
CCL20P78556 SNORD92-201ENST00000585078 85 ntBASIC-0.33□□□□□ -2.46
CCL20P78556 SNORA72.1-201ENST00000363485 129 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 SNORA63C-201ENST00000364578 129 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 SNORA1.2-201ENST00000365189 134 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 RNU6-442P-201ENST00000383968 104 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 SNORA72-201ENST00000384339 132 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 RNU6-929P-201ENST00000384429 107 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 MIR23A-201ENST00000385245 73 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 MIR802-201ENST00000390235 94 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 MIR1257-201ENST00000408490 117 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 RNU6-847P-201ENST00000411115 108 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 AC090844.1-201ENST00000422019 156 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.34□□□□□ -2.46
CCL20P78556 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.34□□□□□ -2.46
CCL20P78556 RNU7-87P-201ENST00000459343 62 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 AC091959.1-201ENST00000495857 238 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 RNU6-256P-201ENST00000516747 97 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 RNU2-12P-201ENST00000517216 168 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.34□□□□□ -2.46
CCL20P78556 MIR4298-201ENST00000584380 73 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 AC007742.2-201ENST00000618226 398 ntBASIC-0.34□□□□□ -2.46
CCL20P78556 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 SNORA25.9-201ENST00000365087 128 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 RNU6-596P-201ENST00000365395 98 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 MIR760-201ENST00000390220 80 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 MIR190B-201ENST00000401119 79 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 AL031003.1-201ENST00000404229 172 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 RNU6-855P-201ENST00000410395 104 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 MIR18B-201ENST00000454574 71 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 RNU7-185P-201ENST00000459215 60 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.35□□□□□ -2.47
CCL20P78556 RNU6-469P-201ENST00000516253 101 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 MIR5190-201ENST00000581537 80 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 AC022709.1-201ENST00000615967 87 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 MIR6740-201ENST00000618268 113 ntBASIC-0.35□□□□□ -2.47
CCL20P78556 RNU6-324P-201ENST00000363957 106 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
CCL20P78556 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 SNRPGP14-201ENST00000435400 219 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 MTND3P7-201ENST00000474435 343 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 AC092989.1-201ENST00000481235 277 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 RN7SKP298-201ENST00000515950 94 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.36□□□□□ -2.47
CCL20P78556 MIR4743-201ENST00000584576 69 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 AC087752.4-201ENST00000605911 462 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 MIR7107-201ENST00000611489 80 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 AL050303.3-201ENST00000613704 284 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 MIR1295B-201ENST00000636144 60 ntBASIC-0.36□□□□□ -2.47
CCL20P78556 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 RNU6-268P-201ENST00000364174 107 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 AL512326.2-201ENST00000426359 151 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 RNU6-237P-201ENST00000515985 71 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.37□□□□□ -2.47
CCL20P78556 MIR3672-201ENST00000584290 82 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 AC087685.1-201ENST00000587507 141 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 AC006380.1-201ENST00000603598 186 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 AL391262.2-201ENST00000622466 494 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 SNORD38B-202ENST00000625943 69 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 AC068137.3-201ENST00000639191 341 ntBASIC-0.37□□□□□ -2.47
CCL20P78556 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 RNU6-767P-201ENST00000384132 107 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 RNU6-187P-201ENST00000384139 106 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 MIR518F-201ENST00000384973 87 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 SNORA26.5-201ENST00000391215 123 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCL20P78556 RNU7-66P-201ENST00000459469 62 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 RNU2-13P-201ENST00000515909 113 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.38□□□□□ -2.47
CCL20P78556 AL158211.1-201ENST00000566763 763 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 AC004467.1-201ENST00000615678 330 ntBASIC-0.38□□□□□ -2.47
CCL20P78556 AC022306.2-201ENST00000617563 647 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms