Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC005776.1-201ENST00000603164 290 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 AC116353.2-201ENST00000505332 712 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 AC104072.1-201ENST00000568817 668 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 AC010332.2-201ENST00000613083 1904 ntBASIC-0.77□□□□□ -2.53
PRKDCP78527 SNORA26.5-201ENST00000391215 123 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 AC137499.1-201ENST00000427602 88 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.78□□□□□ -2.53
PRKDCP78527 MTND1P11-201ENST00000456661 876 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 MTCO2P6-201ENST00000463134 685 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.78□□□□□ -2.53
PRKDCP78527 AP000676.1-201ENST00000533307 52 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 RNU6-280P-201ENST00000364145 104 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 SNORD115-48-201ENST00000364764 76 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 SNORD114-29-201ENST00000364819 70 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 SNORA72.3-201ENST00000365074 132 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.78□□□□□ -2.53
PRKDCP78527 MTND4LP7-201ENST00000431728 294 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 AC105417.1-201ENST00000514691 285 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.78□□□□□ -2.53
PRKDCP78527 SNORA36A-201ENST00000384221 132 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 FCF1P4-201ENST00000448326 183 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.78□□□□□ -2.53
PRKDCP78527 MTND5P18-201ENST00000445624 1801 ntBASIC-0.78□□□□□ -2.53
PRKDCP78527 RNU6-933P-201ENST00000384424 107 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 RNU6-883P-201ENST00000384597 107 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 MTATP6P17-201ENST00000431030 672 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.79□□□□□ -2.54
PRKDCP78527 RNU6-150P-201ENST00000516237 95 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 MTND1P8-201ENST00000571424 950 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AC073539.2-201ENST00000597113 165 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AL158050.2-201ENST00000605336 568 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 SNORA70.25-201ENST00000612741 95 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AP003733.2-201ENST00000529409 171 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AP001836.1-201ENST00000604675 523 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 RNU6-428P-201ENST00000362942 107 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 RNU4-92P-201ENST00000363783 136 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 MTCO2P11-201ENST00000431069 680 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AC098614.3-201ENST00000438957 440 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 RPL30P15-201ENST00000457129 321 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.79□□□□□ -2.54
PRKDCP78527 RNU6-107P-201ENST00000516643 102 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 RNA5SP33-201ENST00000516687 98 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 MIR4280-201ENST00000582178 76 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.79□□□□□ -2.54
PRKDCP78527 AL390729.2-201ENST00000416137 156 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AC016907.1-201ENST00000419483 435 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AC114878.1-201ENST00000441166 358 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.79□□□□□ -2.54
PRKDCP78527 AC107934.1-201ENST00000522215 217 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.79□□□□□ -2.54
PRKDCP78527 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.79□□□□□ -2.54
PRKDCP78527 AL356055.1-201ENST00000602528 446 ntBASIC-0.79□□□□□ -2.54
PRKDCP78527 MT-TF-201ENST00000387314 71 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.8□□□□□ -2.54
PRKDCP78527 RNA5SP47-201ENST00000517230 109 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 MIR570-201ENST00000384917 97 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 AC022137.1-201ENST00000483735 151 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.8□□□□□ -2.54
PRKDCP78527 AC008608.1-201ENST00000603910 127 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 RNU5B-1-201ENST00000363286 116 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 RNU6-236P-201ENST00000363886 106 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.8□□□□□ -2.54
PRKDCP78527 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
PRKDCP78527 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
PRKDCP78527 RNU2-11P-201ENST00000459191 187 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 AC072039.2-201ENST00000608883 439 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 AC137590.2-201ENST00000619709 240 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 AC019226.2-201ENST00000625973 424 ntBASIC-0.8□□□□□ -2.54
PRKDCP78527 MT-TM-201ENST00000387377 68 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 RNU6-131P-201ENST00000391144 107 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 SUMO1P3-201ENST00000439961 304 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 MIR3146-201ENST00000580367 79 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 MTATP6P18-201ENST00000417994 673 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 SNORD45.4-201ENST00000516629 73 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 AL445435.1-201ENST00000604232 665 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 AL353572.1-201ENST00000442490 417 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 U8.19-201ENST00000459095 133 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 U8.22-201ENST00000459141 133 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 AC069113.1-201ENST00000517763 267 ntBASIC-0.81□□□□□ -2.54
PRKDCP78527 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.81□□□□□ -2.54
PRKDCP78527 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.81□□□□□ -2.54
PRKDCP78527 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 RNU1-141P-201ENST00000364623 158 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 RNU6-576P-201ENST00000390854 102 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 SNORD110-201ENST00000408189 75 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.82□□□□□ -2.54
PRKDCP78527 AL512286.1-201ENST00000439244 400 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 331.1 ms