Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 SUMO1P2-201ENST00000452524 304 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 MIR2053-201ENST00000459295 91 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 RPL17P19-201ENST00000489069 552 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 RNU6-1337P-201ENST00000516525 95 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 AC055872.1-201ENST00000570978 278 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 AC005899.2-201ENST00000584353 90 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 MIR3192-201ENST00000584920 77 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 AL391903.3-201ENST00000612158 163 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.64□□□□□ -2.31
CCNA1P78396 AL591926.4-201ENST00000616895 298 ntBASIC0.64□□□□□ -2.31
CCNA1P78396 RNU6-833P-201ENST00000363486 107 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 RNU6-961P-201ENST00000363893 105 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 AC093019.1-201ENST00000443135 252 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 AC114811.1-201ENST00000507207 168 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.63□□□□□ -2.31
CCNA1P78396 Y_RNA.655-201ENST00000515919 96 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 RNU6-307P-201ENST00000516743 106 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 RNU2-12P-201ENST00000517216 168 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 AL358944.1-201ENST00000528537 144 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 AC025627.3-201ENST00000582078 182 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
CCNA1P78396 AC004467.1-201ENST00000615678 330 ntBASIC0.63□□□□□ -2.31
CCNA1P78396 AC068700.1-201ENST00000565862 3754 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 Y_RNA.72-201ENST00000362894 103 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 Y_RNA.361-201ENST00000365515 120 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 MIR516B2-201ENST00000385190 85 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 AL031003.1-201ENST00000404229 172 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 RNU4-14P-201ENST00000410858 122 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 AL162725.1-201ENST00000435405 301 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 AC116353.2-201ENST00000505332 712 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 RNU7-30P-201ENST00000516835 62 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 PRELID3BP2-201ENST00000605362 201 ntBASIC0.62□□□□□ -2.31
CCNA1P78396 Y_RNA.330-201ENST00000365230 109 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 RNU6-1310P-201ENST00000384153 107 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 MIR452-201ENST00000385020 85 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CCNA1P78396 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.61□□□□□ -2.31
CCNA1P78396 RPS20P10-201ENST00000451209 253 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 RPL30P15-201ENST00000457129 321 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 RNU6-358P-201ENST00000516564 75 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 AC087588.2-201ENST00000617667 426 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 AC027279.3-201ENST00000625055 122 ntBASIC0.61□□□□□ -2.31
CCNA1P78396 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
CCNA1P78396 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CCNA1P78396 SNORD114-7-201ENST00000362520 77 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 SNORA25.3-201ENST00000363205 127 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 SNORA69.1-201ENST00000390904 137 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 MIR1298-201ENST00000408783 112 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 Y_RNA.592-201ENST00000410274 109 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 RNU6-370P-201ENST00000411008 104 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 MTND4P28-201ENST00000426217 387 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 MTND1P34-201ENST00000438556 671 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 RNA5SP330-201ENST00000517096 96 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
CCNA1P78396 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.6□□□□□ -2.31
CCNA1P78396 MIR103A2-201ENST00000362154 78 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 MIR330-201ENST00000362196 94 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 Y_RNA.101-201ENST00000363154 102 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 Y_RNA.115-201ENST00000363272 98 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 Y_RNA.172-201ENST00000363765 102 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 RNY3P11-201ENST00000364153 102 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 U8.5-201ENST00000364528 136 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 Y_RNA.253-201ENST00000364562 112 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 RNU6-1335P-201ENST00000365426 107 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 RNU6-1297P-201ENST00000384415 104 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 RNU6-1304P-201ENST00000411374 106 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 AC114737.2-201ENST00000421583 173 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.59□□□□□ -2.31
CCNA1P78396 MTND1P4-201ENST00000435196 415 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 Y_RNA.635-201ENST00000459041 101 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 RNU7-169P-201ENST00000459456 61 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 MIR2355-201ENST00000517199 87 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 AC023827.1-201ENST00000569247 97 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CCNA1P78396 Z83818.1-201ENST00000603584 150 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 AC006380.1-201ENST00000603598 186 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 MIR8087-201ENST00000612745 78 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.59□□□□□ -2.31
CCNA1P78396 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.59□□□□□ -2.31
CCNA1P78396 RNA5SP264-201ENST00000363115 107 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 RNU6-324P-201ENST00000363957 106 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 RNU6-767P-201ENST00000384132 107 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 Y_RNA.646-201ENST00000410980 101 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
CCNA1P78396 AL390729.2-201ENST00000416137 156 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 MLLT10P1-201ENST00000418346 262 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 FCF1P4-201ENST00000448326 183 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.58□□□□□ -2.32
CCNA1P78396 RNU7-41P-201ENST00000515917 61 ntBASIC0.58□□□□□ -2.32
CCNA1P78396 RNU6-155P-201ENST00000516347 100 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms