Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
ACTBP60709 RNA5SP257-201ENST00000363023 116 ntBASIC0.01□□□□□ -2.41
ACTBP60709 RNY1P16-201ENST00000363063 111 ntBASIC0.01□□□□□ -2.41
ACTBP60709 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
ACTBP60709 RNU6-842P-201ENST00000384269 107 ntBASIC0.01□□□□□ -2.41
ACTBP60709 MIR520F-201ENST00000384824 87 ntBASIC0.01□□□□□ -2.41
ACTBP60709 DEFB108C-201ENST00000400154 252 ntBASIC0.01□□□□□ -2.41
ACTBP60709 SNORD83.1-201ENST00000411362 77 ntBASIC0.01□□□□□ -2.41
ACTBP60709 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.01□□□□□ -2.41
ACTBP60709 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.01□□□□□ -2.41
ACTBP60709 SNORA40.9-201ENST00000515895 93 ntBASIC0.01□□□□□ -2.41
ACTBP60709 AL512360.1-201ENST00000555346 234 ntBASIC0.01□□□□□ -2.41
ACTBP60709 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.01□□□□□ -2.41
ACTBP60709 EIF1P4-201ENST00000572664 335 ntBASIC0.01□□□□□ -2.41
ACTBP60709 MIR4804-201ENST00000581683 73 ntBASIC0.01□□□□□ -2.41
ACTBP60709 AC012433.1-201ENST00000588916 398 ntBASIC0.01□□□□□ -2.41
ACTBP60709 AC119751.7-201ENST00000600494 245 ntBASIC0.01□□□□□ -2.41
ACTBP60709 AL162413.1-201ENST00000603198 110 ntBASIC0.01□□□□□ -2.41
ACTBP60709 AC124864.2-201ENST00000624736 186 ntBASIC0.01□□□□□ -2.41
ACTBP60709 RNU6-1084P-201ENST00000362498 107 ntBASIC0□□□□□ -2.41
ACTBP60709 RNU6-451P-201ENST00000362921 107 ntBASIC0□□□□□ -2.41
ACTBP60709 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
ACTBP60709 RNU6-318P-201ENST00000384283 103 ntBASIC0□□□□□ -2.41
ACTBP60709 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0□□□□□ -2.41
ACTBP60709 U8.19-201ENST00000459095 133 ntBASIC0□□□□□ -2.41
ACTBP60709 U8.22-201ENST00000459141 133 ntBASIC0□□□□□ -2.41
ACTBP60709 HMGN1P10-201ENST00000474557 553 ntBASIC0□□□□□ -2.41
ACTBP60709 AC019235.1-201ENST00000503847 207 ntBASIC0□□□□□ -2.41
ACTBP60709 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0□□□□□ -2.41
ACTBP60709 RNU6-830P-201ENST00000516353 107 ntBASIC0□□□□□ -2.41
ACTBP60709 RNU6-977P-201ENST00000516411 103 ntBASIC0□□□□□ -2.41
ACTBP60709 RNU4-77P-201ENST00000516692 156 ntBASIC0□□□□□ -2.41
ACTBP60709 Y_RNA.717-201ENST00000517106 92 ntBASIC0□□□□□ -2.41
ACTBP60709 AC105029.1-201ENST00000520250 669 ntBASIC0□□□□□ -2.41
ACTBP60709 AC069113.3-201ENST00000521019 150 ntBASIC0□□□□□ -2.41
ACTBP60709 MIR2909-201ENST00000617113 69 ntBASIC0□□□□□ -2.41
ACTBP60709 RNU6-874P-201ENST00000362390 105 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 SNORD118-201ENST00000363593 134 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 RNU6-934P-201ENST00000365154 107 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 RNU6-131P-201ENST00000391144 107 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 SNORD71-201ENST00000411292 86 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 SNRPGP10-201ENST00000432323 225 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 SNORD5.1-201ENST00000458800 75 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 AC010424.1-201ENST00000506336 297 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 SNORA25.12-201ENST00000516202 82 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.01□□□□□ -2.41
ACTBP60709 MIR5190-201ENST00000581537 80 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 MIR3942-201ENST00000585264 109 ntBASIC-0.01□□□□□ -2.41
ACTBP60709 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.01□□□□□ -2.41
ACTBP60709 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 RNY3P3-201ENST00000363816 102 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
ACTBP60709 SNORD100-201ENST00000408573 76 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 RNU2-54P-201ENST00000410299 190 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 USP9YP30-201ENST00000430729 455 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 RNU7-56P-201ENST00000458744 62 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 RNA5SP94-201ENST00000516917 108 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 MIR548AO-201ENST00000579992 96 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 NBR2-204ENST00000587322 63 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 AL391262.2-201ENST00000622466 494 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
ACTBP60709 RNU6-879P-201ENST00000364328 108 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 RNU6-815P-201ENST00000384080 113 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 RNU2-61P-201ENST00000411069 191 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 MLLT10P1-201ENST00000418346 262 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 SNRPGP14-201ENST00000435400 219 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 AC093534.1-201ENST00000504977 132 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.03□□□□□ -2.41
ACTBP60709 AC006362.1-201ENST00000567392 174 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 MIR4305-201ENST00000583252 102 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 AC005014.2-201ENST00000607795 599 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 AC090582.1-201ENST00000636321 199 ntBASIC-0.03□□□□□ -2.41
ACTBP60709 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 RNU6-259P-201ENST00000383999 107 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 RNU6-483P-201ENST00000384088 108 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 SNORA72-201ENST00000384339 132 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 RNU6-780P-201ENST00000391030 104 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 MTCO2P27-201ENST00000420740 428 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.04□□□□□ -2.42
ACTBP60709 MTND1P17-201ENST00000448961 204 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.04□□□□□ -2.42
ACTBP60709 RNU6-864P-201ENST00000516256 108 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.04□□□□□ -2.42
ACTBP60709 MIR4771-2-201ENST00000577758 74 ntBASIC-0.04□□□□□ -2.42
ACTBP60709 MIR4771-1-201ENST00000582617 74 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms