Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 Y_RNA.540-201ENST00000384638 111 ntBASIC1.02□□□□□ -2.25
SMSP52788 MIR452-201ENST00000385020 85 ntBASIC1.02□□□□□ -2.25
SMSP52788 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.02□□□□□ -2.25
SMSP52788 AC104332.1-201ENST00000440471 797 ntBASIC1.02□□□□□ -2.25
SMSP52788 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.02□□□□□ -2.25
SMSP52788 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.02□□□□□ -2.25
SMSP52788 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.02□□□□□ -2.25
SMSP52788 RNU6-155P-201ENST00000516347 100 ntBASIC1.02□□□□□ -2.25
SMSP52788 RN7SKP295-201ENST00000517264 153 ntBASIC1.02□□□□□ -2.25
SMSP52788 RNU6-1116P-201ENST00000517269 99 ntBASIC1.02□□□□□ -2.25
SMSP52788 PRELID3BP2-201ENST00000605362 201 ntBASIC1.02□□□□□ -2.25
SMSP52788 AL591926.4-201ENST00000616895 298 ntBASIC1.02□□□□□ -2.25
SMSP52788 MTND4LP32-201ENST00000636111 270 ntBASIC1.02□□□□□ -2.25
SMSP52788 U6.92-201ENST00000636464 89 ntBASIC1.02□□□□□ -2.25
SMSP52788 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SMSP52788 SNORD114-26-201ENST00000363543 72 ntBASIC1.01□□□□□ -2.25
SMSP52788 Y_RNA.146-201ENST00000363549 102 ntBASIC1.01□□□□□ -2.25
SMSP52788 Y_RNA.187-201ENST00000363918 113 ntBASIC1.01□□□□□ -2.25
SMSP52788 Y_RNA.463-201ENST00000384271 102 ntBASIC1.01□□□□□ -2.25
SMSP52788 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
SMSP52788 RNU6-710P-201ENST00000410424 105 ntBASIC1.01□□□□□ -2.25
SMSP52788 AL390729.2-201ENST00000416137 156 ntBASIC1.01□□□□□ -2.25
SMSP52788 MRPL35P3-201ENST00000421557 364 ntBASIC1.01□□□□□ -2.25
SMSP52788 AC093019.1-201ENST00000443135 252 ntBASIC1.01□□□□□ -2.25
SMSP52788 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
SMSP52788 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
SMSP52788 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
SMSP52788 AC005972.2-201ENST00000604690 348 ntBASIC1.01□□□□□ -2.25
SMSP52788 MIR1302-1-201ENST00000637932 143 ntBASIC1.01□□□□□ -2.25
SMSP52788 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SMSP52788 Y_RNA.36-201ENST00000362602 112 ntBASIC1□□□□□ -2.25
SMSP52788 SNORD68-201ENST00000363214 84 ntBASIC1□□□□□ -2.25
SMSP52788 Y_RNA.354-201ENST00000365448 111 ntBASIC1□□□□□ -2.25
SMSP52788 Y_RNA.363-201ENST00000365529 113 ntBASIC1□□□□□ -2.25
SMSP52788 AC117470.1-201ENST00000381974 330 ntBASIC1□□□□□ -2.25
SMSP52788 Y_RNA.428-201ENST00000384078 102 ntBASIC1□□□□□ -2.25
SMSP52788 Y_RNA.462-201ENST00000384268 102 ntBASIC1□□□□□ -2.25
SMSP52788 SNORA72-201ENST00000384339 132 ntBASIC1□□□□□ -2.25
SMSP52788 RNU6-342P-201ENST00000384521 104 ntBASIC1□□□□□ -2.25
SMSP52788 Y_RNA.570-201ENST00000384750 101 ntBASIC1□□□□□ -2.25
SMSP52788 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1□□□□□ -2.25
SMSP52788 MTCO2P27-201ENST00000420740 428 ntBASIC1□□□□□ -2.25
SMSP52788 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
SMSP52788 AC002429.1-201ENST00000437672 148 ntBASIC1□□□□□ -2.25
SMSP52788 RPEP5-201ENST00000441137 268 ntBASIC1□□□□□ -2.25
SMSP52788 AC114811.1-201ENST00000507207 168 ntBASIC1□□□□□ -2.25
SMSP52788 SNORA25.10-201ENST00000515926 124 ntBASIC1□□□□□ -2.25
SMSP52788 RNU6-947P-201ENST00000516264 106 ntBASIC1□□□□□ -2.25
SMSP52788 SNORD116.3-201ENST00000517176 78 ntBASIC1□□□□□ -2.25
SMSP52788 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1□□□□□ -2.25
SMSP52788 MIR4272-201ENST00000635924 64 ntBASIC1□□□□□ -2.25
SMSP52788 AL442644.1-201ENST00000454390 3105 ntBASIC0.99□□□□□ -2.25
SMSP52788 SNORA72.1-201ENST00000363485 129 ntBASIC0.99□□□□□ -2.25
SMSP52788 Y_RNA.253-201ENST00000364562 112 ntBASIC0.99□□□□□ -2.25
SMSP52788 MCFD2P1-201ENST00000417812 300 ntBASIC0.99□□□□□ -2.25
SMSP52788 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.99□□□□□ -2.25
SMSP52788 RPS26P48-201ENST00000491713 339 ntBASIC0.99□□□□□ -2.25
SMSP52788 RNU6-966P-201ENST00000516479 104 ntBASIC0.99□□□□□ -2.25
SMSP52788 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
SMSP52788 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
SMSP52788 AC005730.3-201ENST00000583067 366 ntBASIC0.99□□□□□ -2.25
SMSP52788 AL391903.3-201ENST00000612158 163 ntBASIC0.99□□□□□ -2.25
SMSP52788 AC011476.5-201ENST00000615594 130 ntBASIC0.99□□□□□ -2.25
SMSP52788 AL138825.1-201ENST00000618587 192 ntBASIC0.99□□□□□ -2.25
SMSP52788 AL008636.1-201ENST00000625038 1018 ntBASIC0.99□□□□□ -2.25
SMSP52788 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SMSP52788 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SMSP52788 Y_RNA.172-201ENST00000363765 102 ntBASIC0.98□□□□□ -2.25
SMSP52788 RNU6-324P-201ENST00000363957 106 ntBASIC0.98□□□□□ -2.25
SMSP52788 RNU1-115P-201ENST00000365329 160 ntBASIC0.98□□□□□ -2.25
SMSP52788 RNU6-708P-201ENST00000384217 107 ntBASIC0.98□□□□□ -2.25
SMSP52788 MIR522-201ENST00000385071 87 ntBASIC0.98□□□□□ -2.25
SMSP52788 Y_RNA.621-201ENST00000411065 96 ntBASIC0.98□□□□□ -2.25
SMSP52788 PIGPP3-201ENST00000425307 415 ntBASIC0.98□□□□□ -2.25
SMSP52788 RPS20P10-201ENST00000451209 253 ntBASIC0.98□□□□□ -2.25
SMSP52788 AC005042.3-201ENST00000453230 174 ntBASIC0.98□□□□□ -2.25
SMSP52788 AC245047.8-201ENST00000456455 284 ntBASIC0.98□□□□□ -2.25
SMSP52788 SNORD111.1-201ENST00000516421 86 ntBASIC0.98□□□□□ -2.25
SMSP52788 AC006600.1-201ENST00000572529 153 ntBASIC0.98□□□□□ -2.25
SMSP52788 AL096861.1-201ENST00000610899 123 ntBASIC0.98□□□□□ -2.25
SMSP52788 RNU6-1115P-201ENST00000362490 106 ntBASIC0.97□□□□□ -2.25
SMSP52788 RNU6-1323P-201ENST00000384025 107 ntBASIC0.97□□□□□ -2.25
SMSP52788 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
SMSP52788 MIR1298-201ENST00000408783 112 ntBASIC0.97□□□□□ -2.25
SMSP52788 Y_RNA.632-201ENST00000459189 102 ntBASIC0.97□□□□□ -2.25
SMSP52788 SNORD19B-201ENST00000459623 84 ntBASIC0.97□□□□□ -2.25
SMSP52788 AC091951.2-201ENST00000500762 203 ntBASIC0.97□□□□□ -2.25
SMSP52788 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.97□□□□□ -2.25
SMSP52788 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.97□□□□□ -2.25
SMSP52788 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SMSP52788 Y_RNA.252-201ENST00000364556 101 ntBASIC0.96□□□□□ -2.26
SMSP52788 SNORD114-24-201ENST00000365029 72 ntBASIC0.96□□□□□ -2.26
SMSP52788 RNU6-1175P-201ENST00000365200 107 ntBASIC0.96□□□□□ -2.26
SMSP52788 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
SMSP52788 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
SMSP52788 MIR15B-201ENST00000385045 98 ntBASIC0.96□□□□□ -2.26
SMSP52788 AC096644.2-201ENST00000429278 159 ntBASIC0.96□□□□□ -2.26
SMSP52788 RNU7-21P-201ENST00000459430 62 ntBASIC0.96□□□□□ -2.26
SMSP52788 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
SMSP52788 SNORA40.14-201ENST00000516543 86 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms