Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RPS20P10-201ENST00000451209 253 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 RNU7-152P-201ENST00000458982 64 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 Y_RNA.632-201ENST00000459189 102 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 AC082651.2-201ENST00000496833 166 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.7□□□□□ -2.3
CX3CR1P49238 CYCTP-201ENST00000504253 315 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 Y_RNA.661-201ENST00000516003 99 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 RNU6-507P-201ENST00000516045 100 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 AC144568.1-201ENST00000520139 137 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 AC136628.3-201ENST00000521868 290 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
CX3CR1P49238 AL355375.2-201ENST00000574825 175 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 MIR4423-201ENST00000580922 80 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
CX3CR1P49238 AC022441.3-201ENST00000605737 136 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 AL391903.3-201ENST00000612158 163 ntBASIC0.7□□□□□ -2.3
CX3CR1P49238 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.7□□□□□ -2.3
CX3CR1P49238 Y_RNA.80-201ENST00000362996 102 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 SNORA72.1-201ENST00000363485 129 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 RNU6-324P-201ENST00000363957 106 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 Y_RNA.259-201ENST00000364619 101 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 Y_RNA.485-201ENST00000384395 102 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 Y_RNA.570-201ENST00000384750 101 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 RNU6-321P-201ENST00000410912 106 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 Y_RNA.621-201ENST00000411065 96 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 LINC01399-202ENST00000458450 244 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 RNU7-21P-201ENST00000459430 62 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.69□□□□□ -2.3
CX3CR1P49238 PRDX4P1-201ENST00000507189 574 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 RNU6-237P-201ENST00000515985 71 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 SNORD111.1-201ENST00000516421 86 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 RNU6-113P-201ENST00000516653 101 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 AP003716.2-201ENST00000528260 108 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 AC006600.1-201ENST00000572529 153 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 UBE2V2P2-201ENST00000587677 504 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 AC027279.3-201ENST00000625055 122 ntBASIC0.69□□□□□ -2.3
CX3CR1P49238 Y_RNA.5-201ENST00000362334 102 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 Y_RNA.27-201ENST00000362540 103 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 SNORD50B-201ENST00000364995 70 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 RNU6-1175P-201ENST00000365200 107 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 Y_RNA.338-201ENST00000365320 114 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 Y_RNA.529-201ENST00000384586 119 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 AL590004.1-201ENST00000405321 300 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 AL390729.2-201ENST00000416137 156 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 MTCO2P27-201ENST00000420740 428 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 AF228730.4-201ENST00000421457 183 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 RNU7-41P-201ENST00000515917 61 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 RNU6-875P-201ENST00000516488 106 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 RNU6-911P-201ENST00000516523 104 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 RNU4-77P-201ENST00000516692 156 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 AC006380.1-201ENST00000603598 186 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 SNORD58B-201ENST00000607313 66 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
CX3CR1P49238 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
CX3CR1P49238 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CX3CR1P49238 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 Y_RNA.58-201ENST00000362807 102 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 SNORA25.3-201ENST00000363205 127 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 Y_RNA.154-201ENST00000363624 102 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 RNY3P1-201ENST00000365085 102 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 RNY3-201ENST00000365484 102 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 MCFD2P1-201ENST00000417812 300 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 MTND1P14-201ENST00000427400 950 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 AL603825.1-201ENST00000438481 80 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 AC245047.8-201ENST00000456455 284 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 RNU7-90P-201ENST00000459216 62 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 SNORD19B-201ENST00000459623 84 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 SNORA70.12-201ENST00000516084 153 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 MIR3145-201ENST00000580727 82 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 MIR5188-201ENST00000583467 113 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 DEFB117-201ENST00000602356 141 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 AC122108.2-201ENST00000611946 526 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.67□□□□□ -2.3
CX3CR1P49238 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CX3CR1P49238 AL442644.1-201ENST00000454390 3105 ntBASIC0.67□□□□□ -2.3
CX3CR1P49238 Y_RNA.310-201ENST00000365063 113 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 Y_RNA.315-201ENST00000365117 102 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 AC117470.1-201ENST00000381974 330 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 Y_RNA.458-201ENST00000384240 102 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 MIR628-201ENST00000385229 95 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 MIR1185-1-201ENST00000408598 86 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 MLLT10P1-201ENST00000418346 262 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.66□□□□□ -2.3
CX3CR1P49238 AC099799.1-201ENST00000439809 192 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.66□□□□□ -2.3
CX3CR1P49238 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.66□□□□□ -2.3
CX3CR1P49238 FGF7P4-201ENST00000509595 295 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 VN1R91P-201ENST00000594377 169 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 AC005972.2-201ENST00000604690 348 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 RBM11P1-201ENST00000604951 799 ntBASIC0.66□□□□□ -2.3
CX3CR1P49238 AC112487.2-201ENST00000637950 304 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms