Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 Y_RNA.146-201ENST00000363549 102 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 RNU6-324P-201ENST00000363957 106 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 Y_RNA.253-201ENST00000364562 112 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 Y_RNA.314-201ENST00000365114 102 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 AC090142.3-201ENST00000519012 385 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 AC022441.3-201ENST00000605737 136 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CSNK1A1P48729 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
CSNK1A1P48729 RNU6-490P-201ENST00000362985 107 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 AC117470.1-201ENST00000381974 330 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 Y_RNA.390-201ENST00000383932 102 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 SNORD116-29-201ENST00000384516 83 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 MIR452-201ENST00000385020 85 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 MIR516B2-201ENST00000385190 85 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 MIR1276-201ENST00000408707 83 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.66□□□□□ -2.3
CSNK1A1P48729 AC098614.3-201ENST00000438957 440 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 RBMX2P4-201ENST00000441256 376 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 RPS20P10-201ENST00000451209 253 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 RNU6-277P-201ENST00000516272 106 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 RNU6-911P-201ENST00000516523 104 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 RNU6-699P-201ENST00000517081 110 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 AP003716.2-201ENST00000528260 108 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 AC005972.2-201ENST00000604690 348 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 U6.92-201ENST00000636464 89 ntBASIC0.66□□□□□ -2.3
CSNK1A1P48729 RNA5SP264-201ENST00000363115 107 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 Y_RNA.164-201ENST00000363709 102 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 Y_RNA.230-201ENST00000364348 109 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 SNORD50B-201ENST00000364995 70 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 Y_RNA.329-201ENST00000365209 107 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 MLLT10P1-201ENST00000418346 262 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.65□□□□□ -2.31
CSNK1A1P48729 RNU7-90P-201ENST00000459216 62 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 RNU7-41P-201ENST00000515917 61 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 SNORD45.4-201ENST00000516629 73 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 SNORA74.3-201ENST00000517108 154 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 AC136443.5-201ENST00000603741 370 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 AC025253.1-201ENST00000613623 543 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 MIR8070-201ENST00000616510 88 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 AC099654.14-201ENST00000638599 341 ntBASIC0.65□□□□□ -2.31
CSNK1A1P48729 Y_RNA.27-201ENST00000362540 103 ntBASIC0.64□□□□□ -2.31
CSNK1A1P48729 Y_RNA.387-201ENST00000383918 102 ntBASIC0.64□□□□□ -2.31
CSNK1A1P48729 RNU6-1297P-201ENST00000384415 104 ntBASIC0.64□□□□□ -2.31
CSNK1A1P48729 AL390729.2-201ENST00000416137 156 ntBASIC0.64□□□□□ -2.31
CSNK1A1P48729 AC099799.1-201ENST00000439809 192 ntBASIC0.64□□□□□ -2.31
CSNK1A1P48729 AC022616.4-201ENST00000522985 181 ntBASIC0.64□□□□□ -2.31
CSNK1A1P48729 RBM11P1-201ENST00000604951 799 ntBASIC0.64□□□□□ -2.31
CSNK1A1P48729 RNU6-1084P-201ENST00000362498 107 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 SNORA25.3-201ENST00000363205 127 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 Y_RNA.142-201ENST00000363491 102 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 RNU6-1175P-201ENST00000365200 107 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 SNORA72-201ENST00000384339 132 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 Y_RNA.570-201ENST00000384750 101 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 MIR520C-201ENST00000385005 87 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 MIR136-201ENST00000385207 82 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 MIR1185-1-201ENST00000408598 86 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 MCFD2P1-201ENST00000417812 300 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 SNRPGP10-201ENST00000432323 225 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 Y_RNA.718-201ENST00000517110 102 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 MIR6504-201ENST00000613520 61 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
CSNK1A1P48729 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 Y_RNA.259-201ENST00000364619 101 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 SNORA25.9-201ENST00000365087 128 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 SNORD114-22-201ENST00000365423 72 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 RNU6-1040P-201ENST00000383974 107 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 Y_RNA.463-201ENST00000384271 102 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 MIR628-201ENST00000385229 95 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 RNY4P36-201ENST00000391116 96 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.62□□□□□ -2.31
CSNK1A1P48729 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 SNORA18.7-201ENST00000516910 131 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 RN7SKP295-201ENST00000517264 153 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.62□□□□□ -2.31
CSNK1A1P48729 AC006600.1-201ENST00000572529 153 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 MIR4764-201ENST00000580680 88 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 MIR4423-201ENST00000580922 80 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 VN1R91P-201ENST00000594377 169 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 AC133104.2-201ENST00000615272 193 ntBASIC0.62□□□□□ -2.31
CSNK1A1P48729 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.62□□□□□ -2.31
CSNK1A1P48729 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CSNK1A1P48729 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
CSNK1A1P48729 SNORD81.1-201ENST00000363064 77 ntBASIC0.61□□□□□ -2.31
CSNK1A1P48729 Y_RNA.191-201ENST00000363972 113 ntBASIC0.61□□□□□ -2.31
CSNK1A1P48729 Y_RNA.310-201ENST00000365063 113 ntBASIC0.61□□□□□ -2.31
CSNK1A1P48729 RNU6-1283P-201ENST00000365314 105 ntBASIC0.61□□□□□ -2.31
CSNK1A1P48729 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
CSNK1A1P48729 RNU6-1323P-201ENST00000384025 107 ntBASIC0.61□□□□□ -2.31
CSNK1A1P48729 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
CSNK1A1P48729 MIR520E-201ENST00000384867 87 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms