Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RNU6-917P-201ENST00000516294 104 ntBASIC1.36□□□□□ -2.19
RXRGP48443 RNU6-165P-201ENST00000517170 99 ntBASIC1.36□□□□□ -2.19
RXRGP48443 MIR5188-201ENST00000583467 113 ntBASIC1.36□□□□□ -2.19
RXRGP48443 AC004832.4-201ENST00000608952 331 ntBASIC1.36□□□□□ -2.19
RXRGP48443 AC006157.1-201ENST00000611750 366 ntBASIC1.36□□□□□ -2.19
RXRGP48443 AL591926.4-201ENST00000616895 298 ntBASIC1.36□□□□□ -2.19
RXRGP48443 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.36□□□□□ -2.19
RXRGP48443 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RXRGP48443 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
RXRGP48443 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
RXRGP48443 RNU4-73P-201ENST00000363164 141 ntBASIC1.35□□□□□ -2.19
RXRGP48443 Y_RNA.341-201ENST00000365341 102 ntBASIC1.35□□□□□ -2.19
RXRGP48443 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.35□□□□□ -2.19
RXRGP48443 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.35□□□□□ -2.19
RXRGP48443 MIR4795-201ENST00000584182 89 ntBASIC1.35□□□□□ -2.19
RXRGP48443 AC091925.1-201ENST00000623204 462 ntBASIC1.35□□□□□ -2.19
RXRGP48443 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
RXRGP48443 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RXRGP48443 U8.5-201ENST00000364528 136 ntBASIC1.34□□□□□ -2.19
RXRGP48443 RNU6-53P-201ENST00000365367 106 ntBASIC1.34□□□□□ -2.19
RXRGP48443 RNU6-131P-201ENST00000391144 107 ntBASIC1.34□□□□□ -2.19
RXRGP48443 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
RXRGP48443 RPS20P10-201ENST00000451209 253 ntBASIC1.34□□□□□ -2.19
RXRGP48443 AC093852.1-201ENST00000503587 266 ntBASIC1.34□□□□□ -2.19
RXRGP48443 AC114811.1-201ENST00000507207 168 ntBASIC1.34□□□□□ -2.19
RXRGP48443 RNU4-77P-201ENST00000516692 156 ntBASIC1.34□□□□□ -2.19
RXRGP48443 RNA5SP102-201ENST00000516865 106 ntBASIC1.34□□□□□ -2.19
RXRGP48443 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
RXRGP48443 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
RXRGP48443 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RXRGP48443 AC007742.2-201ENST00000618226 398 ntBASIC1.34□□□□□ -2.19
RXRGP48443 Y_RNA.197-201ENST00000364004 102 ntBASIC1.33□□□□□ -2.2
RXRGP48443 snoU2-30.1-201ENST00000365012 70 ntBASIC1.33□□□□□ -2.2
RXRGP48443 Y_RNA.424-201ENST00000384063 103 ntBASIC1.33□□□□□ -2.2
RXRGP48443 Y_RNA.456-201ENST00000384232 111 ntBASIC1.33□□□□□ -2.2
RXRGP48443 RNY3P14-201ENST00000384309 102 ntBASIC1.33□□□□□ -2.2
RXRGP48443 SNORD41-201ENST00000386967 70 ntBASIC1.33□□□□□ -2.2
RXRGP48443 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
RXRGP48443 RNU6-1248P-201ENST00000391096 64 ntBASIC1.33□□□□□ -2.2
RXRGP48443 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
RXRGP48443 RNU6-475P-201ENST00000516073 104 ntBASIC1.33□□□□□ -2.2
RXRGP48443 RNU6-1116P-201ENST00000517269 99 ntBASIC1.33□□□□□ -2.2
RXRGP48443 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
RXRGP48443 MIR4762-201ENST00000585261 75 ntBASIC1.33□□□□□ -2.2
RXRGP48443 AC104985.2-201ENST00000620598 500 ntBASIC1.33□□□□□ -2.2
RXRGP48443 RNU4-79P-201ENST00000362764 141 ntBASIC1.32□□□□□ -2.2
RXRGP48443 Y_RNA.253-201ENST00000364562 112 ntBASIC1.32□□□□□ -2.2
RXRGP48443 SNORD14.1-201ENST00000365609 90 ntBASIC1.32□□□□□ -2.2
RXRGP48443 Y_RNA.458-201ENST00000384240 102 ntBASIC1.32□□□□□ -2.2
RXRGP48443 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
RXRGP48443 Y_RNA.579-201ENST00000390939 94 ntBASIC1.32□□□□□ -2.2
RXRGP48443 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
RXRGP48443 AL133373.1-201ENST00000497098 94 ntBASIC1.32□□□□□ -2.2
RXRGP48443 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.32□□□□□ -2.2
RXRGP48443 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
RXRGP48443 MIR4423-201ENST00000580922 80 ntBASIC1.32□□□□□ -2.2
RXRGP48443 AC091895.1-201ENST00000624494 256 ntBASIC1.32□□□□□ -2.2
RXRGP48443 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
RXRGP48443 Y_RNA.191-201ENST00000363972 113 ntBASIC1.31□□□□□ -2.2
RXRGP48443 Y_RNA.224-201ENST00000364308 111 ntBASIC1.31□□□□□ -2.2
RXRGP48443 Y_RNA.471-201ENST00000384312 102 ntBASIC1.31□□□□□ -2.2
RXRGP48443 Y_RNA.496-201ENST00000384444 101 ntBASIC1.31□□□□□ -2.2
RXRGP48443 MIR136-201ENST00000385207 82 ntBASIC1.31□□□□□ -2.2
RXRGP48443 SNORD12-201ENST00000391002 90 ntBASIC1.31□□□□□ -2.2
RXRGP48443 AC048334.1-201ENST00000477975 159 ntBASIC1.31□□□□□ -2.2
RXRGP48443 AL117351.2-201ENST00000513571 157 ntBASIC1.31□□□□□ -2.2
RXRGP48443 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
RXRGP48443 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
RXRGP48443 JPX_2.1-201ENST00000614161 69 ntBASIC1.31□□□□□ -2.2
RXRGP48443 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.31□□□□□ -2.2
RXRGP48443 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
RXRGP48443 AL008636.1-201ENST00000625038 1018 ntBASIC1.31□□□□□ -2.2
RXRGP48443 Y_RNA.5-201ENST00000362334 102 ntBASIC1.3□□□□□ -2.2
RXRGP48443 Y_RNA.118-201ENST00000363300 101 ntBASIC1.3□□□□□ -2.2
RXRGP48443 Y_RNA.122-201ENST00000363331 96 ntBASIC1.3□□□□□ -2.2
RXRGP48443 RNU6-1323P-201ENST00000384025 107 ntBASIC1.3□□□□□ -2.2
RXRGP48443 Y_RNA.551-201ENST00000384661 102 ntBASIC1.3□□□□□ -2.2
RXRGP48443 MIR802-201ENST00000390235 94 ntBASIC1.3□□□□□ -2.2
RXRGP48443 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
RXRGP48443 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.3□□□□□ -2.2
RXRGP48443 AF228730.4-201ENST00000421457 183 ntBASIC1.3□□□□□ -2.2
RXRGP48443 MTND1P14-201ENST00000427400 950 ntBASIC1.3□□□□□ -2.2
RXRGP48443 AC040926.1-201ENST00000530195 238 ntBASIC1.3□□□□□ -2.2
RXRGP48443 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
RXRGP48443 POLR3GP1-201ENST00000594073 261 ntBASIC1.3□□□□□ -2.2
RXRGP48443 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
RXRGP48443 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.29□□□□□ -2.2
RXRGP48443 Y_RNA.336-201ENST00000365307 109 ntBASIC1.29□□□□□ -2.2
RXRGP48443 SNORD63-201ENST00000384262 68 ntBASIC1.29□□□□□ -2.2
RXRGP48443 MTND4LP11-201ENST00000422184 280 ntBASIC1.29□□□□□ -2.2
RXRGP48443 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
RXRGP48443 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
RXRGP48443 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
RXRGP48443 AL133255.1-201ENST00000606374 441 ntBASIC1.29□□□□□ -2.2
RXRGP48443 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RXRGP48443 Y_RNA.368-201ENST00000365547 113 ntBASIC1.28□□□□□ -2.2
RXRGP48443 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
RXRGP48443 MIR1298-201ENST00000408783 112 ntBASIC1.28□□□□□ -2.2
RXRGP48443 SNRPGP10-201ENST00000432323 225 ntBASIC1.28□□□□□ -2.2
RXRGP48443 POLR2KP2-201ENST00000438155 177 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms