Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
GDNFP39905 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
GDNFP39905 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
GDNFP39905 RNA5SP387-201ENST00000364226 106 ntBASIC2.71□□□□□ -1.98
GDNFP39905 RNU1-33P-201ENST00000364249 162 ntBASIC2.71□□□□□ -1.98
GDNFP39905 Y_RNA.265-201ENST00000364677 108 ntBASIC2.71□□□□□ -1.98
GDNFP39905 RNU6-573P-201ENST00000383938 106 ntBASIC2.71□□□□□ -1.98
GDNFP39905 SNORA8-201ENST00000384574 139 ntBASIC2.71□□□□□ -1.98
GDNFP39905 Y_RNA.547-201ENST00000384654 119 ntBASIC2.71□□□□□ -1.98
GDNFP39905 MIR183-201ENST00000384958 110 ntBASIC2.71□□□□□ -1.98
GDNFP39905 RNA5SP323-201ENST00000391094 133 ntBASIC2.71□□□□□ -1.98
GDNFP39905 RNU7-123P-201ENST00000515911 60 ntBASIC2.71□□□□□ -1.98
GDNFP39905 SNORA48.11-201ENST00000517015 89 ntBASIC2.71□□□□□ -1.98
GDNFP39905 AP003327.1-201ENST00000529684 127 ntBASIC2.71□□□□□ -1.98
GDNFP39905 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
GDNFP39905 AC084364.2-201ENST00000546924 395 ntBASIC2.71□□□□□ -1.98
GDNFP39905 AC006441.5-201ENST00000612680 209 ntBASIC2.71□□□□□ -1.98
GDNFP39905 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
GDNFP39905 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
GDNFP39905 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
GDNFP39905 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
GDNFP39905 SNORA63.1-201ENST00000362493 131 ntBASIC2.7□□□□□ -1.98
GDNFP39905 RNU6-1084P-201ENST00000362498 107 ntBASIC2.7□□□□□ -1.98
GDNFP39905 Y_RNA.78-201ENST00000362970 110 ntBASIC2.7□□□□□ -1.98
GDNFP39905 RNA5SP72-201ENST00000364442 117 ntBASIC2.7□□□□□ -1.98
GDNFP39905 RNU1-133P-201ENST00000364867 167 ntBASIC2.7□□□□□ -1.98
GDNFP39905 RNU6-442P-201ENST00000383968 104 ntBASIC2.7□□□□□ -1.98
GDNFP39905 RNY1P6-201ENST00000384193 109 ntBASIC2.7□□□□□ -1.98
GDNFP39905 MIR548D2-201ENST00000384955 97 ntBASIC2.7□□□□□ -1.98
GDNFP39905 RPS3AP1-201ENST00000413190 320 ntBASIC2.7□□□□□ -1.98
GDNFP39905 AL353689.1-201ENST00000438895 199 ntBASIC2.7□□□□□ -1.98
GDNFP39905 RNU6-904P-201ENST00000516206 101 ntBASIC2.7□□□□□ -1.98
GDNFP39905 AP002004.2-201ENST00000531656 154 ntBASIC2.7□□□□□ -1.98
GDNFP39905 AL356280.1-201ENST00000603614 379 ntBASIC2.7□□□□□ -1.98
GDNFP39905 AL355297.2-201ENST00000604792 129 ntBASIC2.7□□□□□ -1.98
GDNFP39905 MIR1245B-201ENST00000636115 69 ntBASIC2.7□□□□□ -1.98
GDNFP39905 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.7□□□□□ -1.98
GDNFP39905 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.7□□□□□ -1.98
GDNFP39905 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
GDNFP39905 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
GDNFP39905 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
GDNFP39905 SNORD14E-201ENST00000364009 85 ntBASIC2.69□□□□□ -1.98
GDNFP39905 SNORD46.1-201ENST00000364139 104 ntBASIC2.69□□□□□ -1.98
GDNFP39905 RNU6-268P-201ENST00000364174 107 ntBASIC2.69□□□□□ -1.98
GDNFP39905 RNA5SP139-201ENST00000364340 117 ntBASIC2.69□□□□□ -1.98
GDNFP39905 SNORD114-6-201ENST00000364393 72 ntBASIC2.69□□□□□ -1.98
GDNFP39905 MIR592-201ENST00000384959 97 ntBASIC2.69□□□□□ -1.98
GDNFP39905 MIR34B-201ENST00000385076 84 ntBASIC2.69□□□□□ -1.98
GDNFP39905 AL445646.1-201ENST00000431784 216 ntBASIC2.69□□□□□ -1.98
GDNFP39905 AC009238.1-201ENST00000442165 424 ntBASIC2.69□□□□□ -1.98
GDNFP39905 AC009237.6-201ENST00000446969 424 ntBASIC2.69□□□□□ -1.98
GDNFP39905 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.69□□□□□ -1.98
GDNFP39905 AC023141.11-201ENST00000508864 202 ntBASIC2.69□□□□□ -1.98
GDNFP39905 RNU6-667P-201ENST00000517186 102 ntBASIC2.69□□□□□ -1.98
GDNFP39905 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.69□□□□□ -1.98
GDNFP39905 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.69□□□□□ -1.98
GDNFP39905 SNORD115-40-201ENST00000606510 82 ntBASIC2.69□□□□□ -1.98
GDNFP39905 MALAT1.1-201ENST00000618249 95 ntBASIC2.69□□□□□ -1.98
GDNFP39905 AC012314.7-201ENST00000619693 93 ntBASIC2.69□□□□□ -1.98
GDNFP39905 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
GDNFP39905 AC245060.5-201ENST00000610778 3293 ntBASIC2.69□□□□□ -1.98
GDNFP39905 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GDNFP39905 SNORA63D-201ENST00000364359 132 ntBASIC2.68□□□□□ -1.98
GDNFP39905 Y_RNA.351-201ENST00000365436 96 ntBASIC2.68□□□□□ -1.98
GDNFP39905 Y_RNA.440-201ENST00000384120 114 ntBASIC2.68□□□□□ -1.98
GDNFP39905 RNA5SP274-201ENST00000410484 108 ntBASIC2.68□□□□□ -1.98
GDNFP39905 RNU6-938P-201ENST00000411285 103 ntBASIC2.68□□□□□ -1.98
GDNFP39905 SNRPGP14-201ENST00000435400 219 ntBASIC2.68□□□□□ -1.98
GDNFP39905 PRSS3P4-201ENST00000453323 162 ntBASIC2.68□□□□□ -1.98
GDNFP39905 RPS29P12-201ENST00000460178 152 ntBASIC2.68□□□□□ -1.98
GDNFP39905 TRBV12-1-201ENST00000479785 344 ntBASIC2.68□□□□□ -1.98
GDNFP39905 RN7SKP12-201ENST00000516275 143 ntBASIC2.68□□□□□ -1.98
GDNFP39905 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.68□□□□□ -1.98
GDNFP39905 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.68□□□□□ -1.98
GDNFP39905 AC002984.1-201ENST00000591692 448 ntBASIC2.68□□□□□ -1.98
GDNFP39905 HSPE1P19-201ENST00000603327 295 ntBASIC2.68□□□□□ -1.98
GDNFP39905 AL353149.1-201ENST00000610667 244 ntBASIC2.68□□□□□ -1.98
GDNFP39905 uc_338.25-201ENST00000613756 156 ntBASIC2.68□□□□□ -1.98
GDNFP39905 MIR7975-201ENST00000619350 68 ntBASIC2.68□□□□□ -1.98
GDNFP39905 MIR2052-201ENST00000636055 55 ntBASIC2.68□□□□□ -1.98
GDNFP39905 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
GDNFP39905 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GDNFP39905 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
GDNFP39905 Z83843.1-201ENST00000604070 3685 ntBASIC2.67□□□□□ -1.98
GDNFP39905 SNORA68.1-201ENST00000364537 132 ntBASIC2.67□□□□□ -1.98
GDNFP39905 RNU6-1275P-201ENST00000391087 107 ntBASIC2.67□□□□□ -1.98
GDNFP39905 MIR1289-1-201ENST00000408836 144 ntBASIC2.67□□□□□ -1.98
GDNFP39905 RNU2-63P-201ENST00000410792 194 ntBASIC2.67□□□□□ -1.98
GDNFP39905 RNU6-592P-201ENST00000411333 103 ntBASIC2.67□□□□□ -1.98
GDNFP39905 RPL39P25-201ENST00000449384 154 ntBASIC2.67□□□□□ -1.98
GDNFP39905 RNU1-131P-201ENST00000458943 161 ntBASIC2.67□□□□□ -1.98
GDNFP39905 snoU13.22-201ENST00000459428 104 ntBASIC2.67□□□□□ -1.98
GDNFP39905 RN7SL633P-201ENST00000488974 297 ntBASIC2.67□□□□□ -1.98
GDNFP39905 AL163195.1-201ENST00000496941 348 ntBASIC2.67□□□□□ -1.98
GDNFP39905 SEM1P1-201ENST00000506694 209 ntBASIC2.67□□□□□ -1.98
GDNFP39905 SNORA18.7-201ENST00000516910 131 ntBASIC2.67□□□□□ -1.98
GDNFP39905 RNU6-158P-201ENST00000517104 100 ntBASIC2.67□□□□□ -1.98
GDNFP39905 MIR3163-201ENST00000581592 73 ntBASIC2.67□□□□□ -1.98
GDNFP39905 MIR4305-201ENST00000583252 102 ntBASIC2.67□□□□□ -1.98
GDNFP39905 MIR6733-201ENST00000635723 61 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms