Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.71□□□□□ -2.3
RORAP35398 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.71□□□□□ -2.3
RORAP35398 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.71□□□□□ -2.3
RORAP35398 RNU7-90P-201ENST00000459216 62 ntBASIC0.71□□□□□ -2.3
RORAP35398 RNU6-307P-201ENST00000516743 106 ntBASIC0.71□□□□□ -2.3
RORAP35398 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
RORAP35398 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
RORAP35398 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
RORAP35398 SNORA69.1-201ENST00000390904 137 ntBASIC0.7□□□□□ -2.3
RORAP35398 RNU2-54P-201ENST00000410299 190 ntBASIC0.7□□□□□ -2.3
RORAP35398 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
RORAP35398 MRPS18CP6-201ENST00000423587 223 ntBASIC0.7□□□□□ -2.3
RORAP35398 SNORA70.12-201ENST00000516084 153 ntBASIC0.7□□□□□ -2.3
RORAP35398 RNU6-1012P-201ENST00000516606 109 ntBASIC0.7□□□□□ -2.3
RORAP35398 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
RORAP35398 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.7□□□□□ -2.3
RORAP35398 Y_RNA.160-201ENST00000363677 92 ntBASIC0.69□□□□□ -2.3
RORAP35398 Y_RNA.253-201ENST00000364562 112 ntBASIC0.69□□□□□ -2.3
RORAP35398 SNORD81.2-201ENST00000365153 76 ntBASIC0.69□□□□□ -2.3
RORAP35398 RNU6-890P-201ENST00000384121 107 ntBASIC0.69□□□□□ -2.3
RORAP35398 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.69□□□□□ -2.3
RORAP35398 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
RORAP35398 AC011476.5-201ENST00000615594 130 ntBASIC0.69□□□□□ -2.3
RORAP35398 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
RORAP35398 AL442644.1-201ENST00000454390 3105 ntBASIC0.69□□□□□ -2.3
RORAP35398 RNA5SP264-201ENST00000363115 107 ntBASIC0.68□□□□□ -2.3
RORAP35398 Y_RNA.474-201ENST00000384341 102 ntBASIC0.68□□□□□ -2.3
RORAP35398 RNY3P4-201ENST00000384428 101 ntBASIC0.68□□□□□ -2.3
RORAP35398 RNU6-1105P-201ENST00000384774 107 ntBASIC0.68□□□□□ -2.3
RORAP35398 MIR452-201ENST00000385020 85 ntBASIC0.68□□□□□ -2.3
RORAP35398 MIR625-201ENST00000385047 85 ntBASIC0.68□□□□□ -2.3
RORAP35398 MIR522-201ENST00000385071 87 ntBASIC0.68□□□□□ -2.3
RORAP35398 MIR516B2-201ENST00000385190 85 ntBASIC0.68□□□□□ -2.3
RORAP35398 MIR1185-1-201ENST00000408598 86 ntBASIC0.68□□□□□ -2.3
RORAP35398 MTCO3P10-201ENST00000455912 772 ntBASIC0.68□□□□□ -2.3
RORAP35398 Y_RNA.635-201ENST00000459041 101 ntBASIC0.68□□□□□ -2.3
RORAP35398 RNU7-41P-201ENST00000515917 61 ntBASIC0.68□□□□□ -2.3
RORAP35398 RNU6-436P-201ENST00000516171 114 ntBASIC0.68□□□□□ -2.3
RORAP35398 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.68□□□□□ -2.3
RORAP35398 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
RORAP35398 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
RORAP35398 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.68□□□□□ -2.3
RORAP35398 AC138305.3-201ENST00000624988 240 ntBASIC0.68□□□□□ -2.3
RORAP35398 TPTEP1-208ENST00000636884 213 ntBASIC0.68□□□□□ -2.3
RORAP35398 SNORA25.3-201ENST00000363205 127 ntBASIC0.67□□□□□ -2.3
RORAP35398 RNU6-1335P-201ENST00000365426 107 ntBASIC0.67□□□□□ -2.3
RORAP35398 AC117470.1-201ENST00000381974 330 ntBASIC0.67□□□□□ -2.3
RORAP35398 RNU6-20P-201ENST00000384106 107 ntBASIC0.67□□□□□ -2.3
RORAP35398 Y_RNA.446-201ENST00000384178 104 ntBASIC0.67□□□□□ -2.3
RORAP35398 RNU6-708P-201ENST00000384217 107 ntBASIC0.67□□□□□ -2.3
RORAP35398 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
RORAP35398 MT-TL1-201ENST00000386347 75 ntBASIC0.67□□□□□ -2.3
RORAP35398 Y_RNA.621-201ENST00000411065 96 ntBASIC0.67□□□□□ -2.3
RORAP35398 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
RORAP35398 FCF1P4-201ENST00000448326 183 ntBASIC0.67□□□□□ -2.3
RORAP35398 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.67□□□□□ -2.3
RORAP35398 MTND4LP26-201ENST00000518144 282 ntBASIC0.67□□□□□ -2.3
RORAP35398 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.67□□□□□ -2.3
RORAP35398 Y_RNA.146-201ENST00000363549 102 ntBASIC0.66□□□□□ -2.3
RORAP35398 RNU6-192P-201ENST00000391253 100 ntBASIC0.66□□□□□ -2.3
RORAP35398 AL035398.1-201ENST00000430869 322 ntBASIC0.66□□□□□ -2.3
RORAP35398 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.66□□□□□ -2.3
RORAP35398 CHEK2P4-201ENST00000450340 246 ntBASIC0.66□□□□□ -2.3
RORAP35398 RPS20P10-201ENST00000451209 253 ntBASIC0.66□□□□□ -2.3
RORAP35398 RNU6-1132P-201ENST00000459214 107 ntBASIC0.66□□□□□ -2.3
RORAP35398 RNU7-169P-201ENST00000459456 61 ntBASIC0.66□□□□□ -2.3
RORAP35398 RNU6-470P-201ENST00000515954 104 ntBASIC0.66□□□□□ -2.3
RORAP35398 RN7SKP164-201ENST00000516138 266 ntBASIC0.66□□□□□ -2.3
RORAP35398 SNORA74.3-201ENST00000517108 154 ntBASIC0.66□□□□□ -2.3
RORAP35398 AC005176.2-201ENST00000596933 147 ntBASIC0.66□□□□□ -2.3
RORAP35398 AC022306.2-201ENST00000617563 647 ntBASIC0.66□□□□□ -2.3
RORAP35398 RNU6-626P-201ENST00000363354 107 ntBASIC0.65□□□□□ -2.31
RORAP35398 Y_RNA.248-201ENST00000364501 109 ntBASIC0.65□□□□□ -2.31
RORAP35398 RNU6-342P-201ENST00000384521 104 ntBASIC0.65□□□□□ -2.31
RORAP35398 MIR559-201ENST00000385188 96 ntBASIC0.65□□□□□ -2.31
RORAP35398 MIR613-201ENST00000385248 95 ntBASIC0.65□□□□□ -2.31
RORAP35398 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
RORAP35398 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.65□□□□□ -2.31
RORAP35398 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.65□□□□□ -2.31
RORAP35398 AC006380.1-201ENST00000603598 186 ntBASIC0.65□□□□□ -2.31
RORAP35398 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
RORAP35398 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
RORAP35398 SNORD50B-201ENST00000364995 70 ntBASIC0.64□□□□□ -2.31
RORAP35398 RNU6-1297P-201ENST00000384415 104 ntBASIC0.64□□□□□ -2.31
RORAP35398 SNORD78.2-201ENST00000391076 69 ntBASIC0.64□□□□□ -2.31
RORAP35398 AL390729.2-201ENST00000416137 156 ntBASIC0.64□□□□□ -2.31
RORAP35398 SNRPGP10-201ENST00000432323 225 ntBASIC0.64□□□□□ -2.31
RORAP35398 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
RORAP35398 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
RORAP35398 RNU6-155P-201ENST00000516347 100 ntBASIC0.64□□□□□ -2.31
RORAP35398 SNORD45.4-201ENST00000516629 73 ntBASIC0.64□□□□□ -2.31
RORAP35398 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
RORAP35398 MIR4659A-201ENST00000580269 81 ntBASIC0.64□□□□□ -2.31
RORAP35398 AC131055.1-201ENST00000584626 316 ntBASIC0.64□□□□□ -2.31
RORAP35398 SEPT14P17-201ENST00000617978 177 ntBASIC0.64□□□□□ -2.31
RORAP35398 AC139792.2-201ENST00000624218 587 ntBASIC0.64□□□□□ -2.31
RORAP35398 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.64□□□□□ -2.31
RORAP35398 MIR103A2-201ENST00000362154 78 ntBASIC0.63□□□□□ -2.31
RORAP35398 Y_RNA.330-201ENST00000365230 109 ntBASIC0.63□□□□□ -2.31
RORAP35398 RNU6-876P-201ENST00000391295 104 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms