Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU6-475P-201ENST00000516073 104 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 RNU4-77P-201ENST00000516692 156 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 RNU7-116P-201ENST00000516940 62 ntBASIC1.39□□□□□ -2.19
CAPN3P20807 Y_RNA.197-201ENST00000364004 102 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 U8.5-201ENST00000364528 136 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 SNORA72-201ENST00000384339 132 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 SNORD116-13-201ENST00000384408 92 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 RNU6-21P-201ENST00000384710 107 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 RNU6-855P-201ENST00000410395 104 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 AF228730.4-201ENST00000421457 183 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 RPEP5-201ENST00000441137 268 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 DYNLT3P2-201ENST00000442517 295 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 AL117351.2-201ENST00000513571 157 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 RNU6-917P-201ENST00000516294 104 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 RNU7-110P-201ENST00000516891 62 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 MIR4423-201ENST00000580922 80 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 MIR4795-201ENST00000584182 89 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 AL117336.2-201ENST00000602435 335 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 AC004832.4-201ENST00000608952 331 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 AL008636.1-201ENST00000625038 1018 ntBASIC1.38□□□□□ -2.19
CAPN3P20807 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CAPN3P20807 Y_RNA.58-201ENST00000362807 102 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 Y_RNA.154-201ENST00000363624 102 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 RNY3P1-201ENST00000365085 102 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 Y_RNA.329-201ENST00000365209 107 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 RNY3-201ENST00000365484 102 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 SNORA70.7-201ENST00000384159 133 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 Y_RNA.496-201ENST00000384444 101 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 MIR15B-201ENST00000385045 98 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CAPN3P20807 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 AC104332.1-201ENST00000440471 797 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 RPS20P10-201ENST00000451209 253 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 MIR4762-201ENST00000585261 75 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 BX284668.6-201ENST00000606899 438 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 AL591926.4-201ENST00000616895 298 ntBASIC1.37□□□□□ -2.19
CAPN3P20807 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CAPN3P20807 SNORD114-22-201ENST00000365423 72 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 Y_RNA.456-201ENST00000384232 111 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 SNORD41-201ENST00000386967 70 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
CAPN3P20807 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 RNU6-947P-201ENST00000516264 106 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 AL022345.2-201ENST00000606307 135 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 AC006157.1-201ENST00000611750 366 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CAPN3P20807 AC104985.2-201ENST00000620598 500 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
CAPN3P20807 Y_RNA.5-201ENST00000362334 102 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 RNU4-79P-201ENST00000362764 141 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 Y_RNA.341-201ENST00000365341 102 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 Y_RNA.458-201ENST00000384240 102 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 SNORD63-201ENST00000384262 68 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 Y_RNA.579-201ENST00000390939 94 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 RNU6-1248P-201ENST00000391096 64 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 RNU6-1054P-201ENST00000411293 104 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 HMGN2P32-201ENST00000444648 269 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 FAM106DP-201ENST00000586416 501 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 AL133255.1-201ENST00000606374 441 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 AC007742.2-201ENST00000618226 398 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 MIR6515-201ENST00000619843 57 ntBASIC1.35□□□□□ -2.19
CAPN3P20807 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
CAPN3P20807 RNU6-1084P-201ENST00000362498 107 ntBASIC1.34□□□□□ -2.19
CAPN3P20807 SNORD14.1-201ENST00000365609 90 ntBASIC1.34□□□□□ -2.19
CAPN3P20807 Y_RNA.424-201ENST00000384063 103 ntBASIC1.34□□□□□ -2.19
CAPN3P20807 MTND4LP11-201ENST00000422184 280 ntBASIC1.34□□□□□ -2.19
CAPN3P20807 PIGPP3-201ENST00000425307 415 ntBASIC1.34□□□□□ -2.19
CAPN3P20807 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
CAPN3P20807 LARP7P1-201ENST00000605576 316 ntBASIC1.34□□□□□ -2.19
CAPN3P20807 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CAPN3P20807 Y_RNA.36-201ENST00000362602 112 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 Y_RNA.253-201ENST00000364562 112 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 snoU2-30.1-201ENST00000365012 70 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 RNU6-1323P-201ENST00000384025 107 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 Y_RNA.471-201ENST00000384312 102 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 RNU6-342P-201ENST00000384521 104 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 Y_RNA.551-201ENST00000384661 102 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 RNU6-131P-201ENST00000391144 107 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 AC245047.7-201ENST00000440265 293 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 AC114811.1-201ENST00000507207 168 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 AC040926.1-201ENST00000530195 238 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 AL080274.1-201ENST00000605565 220 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 AC022709.1-201ENST00000615967 87 ntBASIC1.33□□□□□ -2.2
CAPN3P20807 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CAPN3P20807 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
CAPN3P20807 Y_RNA.368-201ENST00000365547 113 ntBASIC1.32□□□□□ -2.2
CAPN3P20807 MLLT10P1-201ENST00000418346 262 ntBASIC1.32□□□□□ -2.2
CAPN3P20807 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.32□□□□□ -2.2
CAPN3P20807 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
CAPN3P20807 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CAPN3P20807 AC008269.2-201ENST00000561915 1105 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms