Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.697-201ENST00000516776 113 ntBASIC-2.9□□□□□ -2.87
TOP2AP11388 MIR6874-201ENST00000635894 71 ntBASIC-2.9□□□□□ -2.87
TOP2AP11388 RNU6-403P-201ENST00000363163 104 ntBASIC-2.91□□□□□ -2.88
TOP2AP11388 RNU6-553P-201ENST00000364047 96 ntBASIC-2.91□□□□□ -2.88
TOP2AP11388 MT-TF-201ENST00000387314 71 ntBASIC-2.91□□□□□ -2.88
TOP2AP11388 VN1R10P-201ENST00000447106 875 ntBASIC-2.91□□□□□ -2.88
TOP2AP11388 RNU6-765P-201ENST00000516916 99 ntBASIC-2.91□□□□□ -2.88
TOP2AP11388 RNU7-161P-201ENST00000517289 62 ntBASIC-2.91□□□□□ -2.88
TOP2AP11388 AC091178.2-201ENST00000584401 117 ntBASIC-2.91□□□□□ -2.88
TOP2AP11388 MIR10A-201ENST00000385043 110 ntBASIC-2.92□□□□□ -2.88
TOP2AP11388 MTND1P27-201ENST00000451117 902 ntBASIC-2.92□□□□□ -2.88
TOP2AP11388 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-2.92□□□□□ -2.88
TOP2AP11388 AC011603.4-201ENST00000611325 277 ntBASIC-2.92□□□□□ -2.88
TOP2AP11388 RNU6-28P-201ENST00000362378 107 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 AL603914.1-201ENST00000401964 204 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-2.93□□□□□ -2.88
TOP2AP11388 SNRPGP7-201ENST00000469016 106 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 AC026414.1-201ENST00000504046 698 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 AC093783.1-201ENST00000612976 329 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-2.93□□□□□ -2.88
TOP2AP11388 RNU6-527P-201ENST00000363425 104 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 Y_RNA.539-201ENST00000384635 107 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-2.93□□□□□ -2.88
TOP2AP11388 snoU13.8-201ENST00000458890 104 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 AC022306.3-201ENST00000619930 550 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 Six3os1_7.1-201ENST00000621512 201 ntBASIC-2.93□□□□□ -2.88
TOP2AP11388 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 SNORA75B-201ENST00000384053 137 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 RNU6-114P-201ENST00000384704 105 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 BX119904.4-201ENST00000424402 301 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 AC078809.1-201ENST00000427601 140 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 snoU13.2-201ENST00000459201 104 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 AC131281.1-201ENST00000522984 164 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 MIR3139-201ENST00000579145 76 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 AL445435.1-201ENST00000604232 665 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 AC005520.5-201ENST00000613926 164 ntBASIC-2.94□□□□□ -2.88
TOP2AP11388 MIR20A-201ENST00000362279 71 ntBASIC-2.95□□□□□ -2.88
TOP2AP11388 MIR30D-201ENST00000362283 70 ntBASIC-2.95□□□□□ -2.88
TOP2AP11388 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.95□□□□□ -2.88
TOP2AP11388 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.95□□□□□ -2.88
TOP2AP11388 RNU6-359P-201ENST00000365466 108 ntBASIC-2.95□□□□□ -2.88
TOP2AP11388 AC108019.1-201ENST00000512540 175 ntBASIC-2.95□□□□□ -2.88
TOP2AP11388 RMST_7.1-201ENST00000621935 268 ntBASIC-2.95□□□□□ -2.88
TOP2AP11388 SNORD115-27-201ENST00000364430 82 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 Y_RNA.456-201ENST00000384232 111 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 MIR507-201ENST00000385234 94 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 MIR1305-201ENST00000408300 86 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 RNU6-77P-201ENST00000410554 91 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 AC010975.2-201ENST00000427781 588 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-2.96□□□□□ -2.88
TOP2AP11388 SNORA25.17-201ENST00000517184 124 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 AC099785.1-201ENST00000605697 437 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 AC011373.1-201ENST00000607270 237 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 AC027449.1-201ENST00000608890 407 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-2.96□□□□□ -2.88
TOP2AP11388 RNU6-395P-201ENST00000365662 106 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 RNU6-484P-201ENST00000384016 107 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 Y_RNA.534-201ENST00000384599 112 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 MTCO2P5-201ENST00000422621 426 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 NDUFB1P2-201ENST00000449477 176 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 RNU7-104P-201ENST00000459398 79 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-2.97□□□□□ -2.88
TOP2AP11388 MIR4438-201ENST00000585271 93 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 BNIP3P40-201ENST00000596017 556 ntBASIC-2.97□□□□□ -2.88
TOP2AP11388 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-2.97□□□□□ -2.88
TOP2AP11388 RNU2-28P-201ENST00000410457 189 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 RNU2-51P-201ENST00000410708 197 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 AC116353.2-201ENST00000505332 712 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-2.98□□□□□ -2.89
TOP2AP11388 AC145423.2-201ENST00000610631 239 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 AC091948.2-201ENST00000636510 279 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 SNORD115-25-201ENST00000362619 82 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 SNORD68-201ENST00000363214 84 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 RNU6-343P-201ENST00000364709 104 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 RNU6-154P-201ENST00000384306 106 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 MIR586-201ENST00000385035 97 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-2.98□□□□□ -2.89
TOP2AP11388 MIR4791-201ENST00000607666 84 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 AC097460.3-201ENST00000623099 442 ntBASIC-2.98□□□□□ -2.89
TOP2AP11388 RNU6-384P-201ENST00000364900 104 ntBASIC-2.99□□□□□ -2.89
TOP2AP11388 RNU6-83P-201ENST00000384568 112 ntBASIC-2.99□□□□□ -2.89
TOP2AP11388 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-2.99□□□□□ -2.89
TOP2AP11388 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-2.99□□□□□ -2.89
TOP2AP11388 RNU6-714P-201ENST00000516963 103 ntBASIC-2.99□□□□□ -2.89
TOP2AP11388 MTND1P36-201ENST00000522384 936 ntBASIC-2.99□□□□□ -2.89
TOP2AP11388 MIR5006-201ENST00000583027 110 ntBASIC-2.99□□□□□ -2.89
TOP2AP11388 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-2.99□□□□□ -2.89
TOP2AP11388 RNU6-164P-201ENST00000364604 103 ntBASIC-3□□□□□ -2.89
TOP2AP11388 MIR548A2-201ENST00000384956 97 ntBASIC-3□□□□□ -2.89
TOP2AP11388 AL359634.1-202ENST00000404721 284 ntBASIC-3□□□□□ -2.89
TOP2AP11388 RNU6-1245P-201ENST00000411130 106 ntBASIC-3□□□□□ -2.89
TOP2AP11388 AC010486.2-201ENST00000505572 483 ntBASIC-3□□□□□ -2.89
TOP2AP11388 RNU4-18P-201ENST00000516751 149 ntBASIC-3□□□□□ -2.89
TOP2AP11388 SNORD115-40-201ENST00000606510 82 ntBASIC-3□□□□□ -2.89
TOP2AP11388 Y_RNA.253-201ENST00000364562 112 ntBASIC-3.01□□□□□ -2.89
TOP2AP11388 SNORD115-26-201ENST00000365067 82 ntBASIC-3.01□□□□□ -2.89
TOP2AP11388 MIR525-201ENST00000384978 85 ntBASIC-3.01□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms