Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 MIR377-201ENST00000362145 69 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 RNY3P3-201ENST00000363816 102 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 RNU6-580P-201ENST00000365159 107 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.368-201ENST00000365547 113 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 RNU6-318P-201ENST00000384283 103 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 SNORD116-8-201ENST00000384365 95 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 RNU6-700P-201ENST00000391043 107 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 SNORD71-201ENST00000411292 86 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 U8.22-201ENST00000459141 133 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 snoU13.21-201ENST00000459368 105 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 AC116353.2-201ENST00000505332 712 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.04□□□□□ -2.4
ZNF728P0DKX0 RNU2-12P-201ENST00000517216 168 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 MIR3611-201ENST00000584484 83 ntBASIC0.04□□□□□ -2.4
ZNF728P0DKX0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.04□□□□□ -2.4
ZNF728P0DKX0 RNU6-874P-201ENST00000362390 105 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 RNA5SP517-201ENST00000364724 117 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 RNU6-934P-201ENST00000365154 107 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 MT-TN-201ENST00000387400 73 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 RNU6-679P-201ENST00000391003 106 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 RNU2-54P-201ENST00000410299 190 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 RNU2-66P-201ENST00000410650 161 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 SNORA40.8-201ENST00000411034 126 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.03□□□□□ -2.4
ZNF728P0DKX0 SNORD5.1-201ENST00000458800 75 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 U8.19-201ENST00000459095 133 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 RNU6-273P-201ENST00000516937 96 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.714-201ENST00000517065 90 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.03□□□□□ -2.4
ZNF728P0DKX0 AC105029.1-201ENST00000520250 669 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.03□□□□□ -2.4
ZNF728P0DKX0 RN7SKP299-201ENST00000606679 301 ntBASIC0.03□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 Y_RNA.38-201ENST00000362617 102 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 SNORD45.3-201ENST00000363836 72 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 SNORD38C-201ENST00000384381 69 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR570-201ENST00000384917 97 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.02□□□□□ -2.41
ZNF728P0DKX0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.02□□□□□ -2.41
ZNF728P0DKX0 SNRPGP10-201ENST00000432323 225 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.02□□□□□ -2.41
ZNF728P0DKX0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.02□□□□□ -2.41
ZNF728P0DKX0 RNU6-864P-201ENST00000516256 108 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 OSBPL9P5-201ENST00000542581 171 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR1273G-201ENST00000577677 100 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR4771-2-201ENST00000577758 74 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR548AO-201ENST00000579992 96 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR4804-201ENST00000581683 73 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR4771-1-201ENST00000582617 74 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 AC005014.2-201ENST00000607795 599 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR6128-201ENST00000615528 109 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 AC004467.1-201ENST00000615678 330 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 MIR6718-201ENST00000616153 80 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 AC078883.4-201ENST00000623218 367 ntBASIC0.02□□□□□ -2.41
ZNF728P0DKX0 SNORD14E-201ENST00000364009 85 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 Y_RNA.358-201ENST00000365491 99 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
ZNF728P0DKX0 SNORA72-201ENST00000384339 132 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 SNORA51.10-201ENST00000384418 136 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 AL031003.1-201ENST00000404229 172 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 SNORD12B-201ENST00000410433 91 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 AC015818.7-201ENST00000428754 109 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 AC087499.7-201ENST00000441958 109 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 MTND1P17-201ENST00000448961 204 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 AP000753.3-201ENST00000604083 169 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 Z99129.1-201ENST00000612510 255 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 AC078938.1-201ENST00000620993 318 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
ZNF728P0DKX0 Y_RNA.172-201ENST00000363765 102 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 RNU6-205P-201ENST00000390858 107 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 RNU2-61P-201ENST00000411069 191 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0□□□□□ -2.41
ZNF728P0DKX0 MTCO2P27-201ENST00000420740 428 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 CEP57L1P1-201ENST00000430943 1201 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0□□□□□ -2.41
ZNF728P0DKX0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0□□□□□ -2.41
ZNF728P0DKX0 RNU6-1088P-201ENST00000516850 104 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 AP003327.1-201ENST00000529684 127 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0□□□□□ -2.41
ZNF728P0DKX0 MIR4676-201ENST00000583078 72 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 AC006380.1-201ENST00000603598 186 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 AC005972.2-201ENST00000604690 348 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 AC090617.10-201ENST00000624308 134 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 MIR3662-201ENST00000637030 95 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 MIR3974-201ENST00000637126 96 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 MIR1321-201ENST00000637766 79 ntBASIC0□□□□□ -2.41
ZNF728P0DKX0 MIR330-201ENST00000362196 94 ntBASIC-0.01□□□□□ -2.41
ZNF728P0DKX0 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.01□□□□□ -2.41
ZNF728P0DKX0 U8.17-201ENST00000391292 132 ntBASIC-0.01□□□□□ -2.41
ZNF728P0DKX0 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
ZNF728P0DKX0 RNU7-56P-201ENST00000458744 62 ntBASIC-0.01□□□□□ -2.41
ZNF728P0DKX0 RNU6-408P-201ENST00000515910 100 ntBASIC-0.01□□□□□ -2.41
ZNF728P0DKX0 RNU6-830P-201ENST00000516353 107 ntBASIC-0.01□□□□□ -2.41
ZNF728P0DKX0 RNU6-566P-201ENST00000516790 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms