Protein–RNA interactions for Protein: P0CI25

TRIM49, Tripartite motif-containing protein 49, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49P0CI25 AC005357.1-201ENST00000588399 301 ntBASIC1.58□□□□□ -2.16
TRIM49P0CI25 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.58□□□□□ -2.16
TRIM49P0CI25 AC011921.3-201ENST00000605540 361 ntBASIC1.58□□□□□ -2.16
TRIM49P0CI25 U6.73-201ENST00000619194 103 ntBASIC1.58□□□□□ -2.16
TRIM49P0CI25 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.58□□□□□ -2.16
TRIM49P0CI25 MIR335-201ENST00000362173 94 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 RNU6-1272P-201ENST00000362776 107 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 RNU1-96P-201ENST00000364163 162 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 RNU6-326P-201ENST00000365480 107 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 Y_RNA.416-201ENST00000384014 113 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 SNORA12.1-201ENST00000390873 148 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 MTCO2P33-201ENST00000402100 465 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 AC074290.1-201ENST00000448883 135 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 RNU1-131P-201ENST00000458943 161 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 AC091021.1-201ENST00000468051 388 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 AC117454.1-201ENST00000491120 168 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 RNA5SP61-201ENST00000516453 100 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 RNU2-34P-201ENST00000516534 121 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 RNU6-1291P-201ENST00000516591 104 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM49P0CI25 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM49P0CI25 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.57□□□□□ -2.16
TRIM49P0CI25 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM49P0CI25 Y_RNA.238-201ENST00000364441 102 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 U8.7-201ENST00000364940 136 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 SNORA53-201ENST00000391141 249 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 AL390729.2-201ENST00000416137 156 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 AC008134.1-201ENST00000420943 193 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 AC104332.1-201ENST00000440471 797 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 RPS4XP11-201ENST00000446897 772 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 RNU7-141P-201ENST00000459304 62 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 AL163195.1-201ENST00000496941 348 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 SNORA27.4-201ENST00000516650 95 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 RNU7-172P-201ENST00000517125 64 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 RNA5SP437-201ENST00000517249 129 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 AC068647.2-201ENST00000637380 353 ntBASIC1.56□□□□□ -2.16
TRIM49P0CI25 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM49P0CI25 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM49P0CI25 Y_RNA.341-201ENST00000365341 102 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 Y_RNA.401-201ENST00000383965 117 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 SNORA72.4-201ENST00000384174 132 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 Y_RNA.556-201ENST00000384677 113 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 AC010154.1-201ENST00000425857 269 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM49P0CI25 RPS27P1-201ENST00000450552 247 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 RNU6-1023P-201ENST00000516137 106 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 SUMO2P18-201ENST00000518873 252 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 AL929325.1-201ENST00000603096 117 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.55□□□□□ -2.16
TRIM49P0CI25 AL353149.1-201ENST00000610667 244 ntBASIC1.55□□□□□ -2.16
TRIM49P0CI25 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM49P0CI25 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM49P0CI25 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 Y_RNA.122-201ENST00000363331 96 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 Y_RNA.274-201ENST00000364714 101 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 Y_RNA.352-201ENST00000365439 102 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 RNU6-1080P-201ENST00000383982 107 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 RNU6-211P-201ENST00000384047 107 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 RNU6-514P-201ENST00000384208 107 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM49P0CI25 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM49P0CI25 AC130289.1-201ENST00000577321 73 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 AL512605.2-201ENST00000592972 256 ntBASIC1.54□□□□□ -2.16
TRIM49P0CI25 UBE2WP1-201ENST00000362030 340 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 Y_RNA.20-201ENST00000362479 113 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 SNORA20.1-201ENST00000364790 130 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 Y_RNA.368-201ENST00000365547 113 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 RNU6-439P-201ENST00000384188 106 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 RNU6-376P-201ENST00000384731 106 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 MIR29C-201ENST00000385231 88 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 RNU6-383P-201ENST00000410864 94 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM49P0CI25 AC024067.1-201ENST00000426199 223 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 RNU7-95P-201ENST00000459222 64 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 RNU6-970P-201ENST00000516312 107 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 SNORA31.10-201ENST00000516482 106 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 AC022559.1-201ENST00000520905 205 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 AC024405.2-202ENST00000532731 184 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 AC084364.2-201ENST00000546924 395 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 MIR4781-201ENST00000585250 76 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.53□□□□□ -2.16
TRIM49P0CI25 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM49P0CI25 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRIM49P0CI25 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM49P0CI25 Y_RNA.267-201ENST00000364679 109 ntBASIC1.52□□□□□ -2.17
TRIM49P0CI25 RNU6-923P-201ENST00000364753 107 ntBASIC1.52□□□□□ -2.17
TRIM49P0CI25 RNU6-1318P-201ENST00000365389 103 ntBASIC1.52□□□□□ -2.17
TRIM49P0CI25 RNA5SP465-201ENST00000391195 109 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms