Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 MIR3914-2-201ENST00000637339 95 ntBASIC3.23□□□□□ -1.89
NEFMP07197 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NEFMP07197 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NEFMP07197 Y_RNA.203-201ENST00000364106 102 ntBASIC3.22□□□□□ -1.89
NEFMP07197 RNU6-429P-201ENST00000384582 108 ntBASIC3.22□□□□□ -1.89
NEFMP07197 RNY4P18-201ENST00000391107 89 ntBASIC3.22□□□□□ -1.89
NEFMP07197 RNU2-70P-201ENST00000410718 179 ntBASIC3.22□□□□□ -1.89
NEFMP07197 AC016909.1-201ENST00000415916 166 ntBASIC3.22□□□□□ -1.89
NEFMP07197 CYCSP49-201ENST00000420810 319 ntBASIC3.22□□□□□ -1.89
NEFMP07197 MICF-203ENST00000432679 129 ntBASIC3.22□□□□□ -1.89
NEFMP07197 RPS12P2-201ENST00000439728 269 ntBASIC3.22□□□□□ -1.89
NEFMP07197 RNU6-772P-201ENST00000516042 105 ntBASIC3.22□□□□□ -1.89
NEFMP07197 PRELID2P1-201ENST00000552837 301 ntBASIC3.22□□□□□ -1.89
NEFMP07197 MIR3616-201ENST00000584070 92 ntBASIC3.22□□□□□ -1.89
NEFMP07197 AC131055.1-201ENST00000584626 316 ntBASIC3.22□□□□□ -1.89
NEFMP07197 AC097639.2-201ENST00000603159 172 ntBASIC3.22□□□□□ -1.89
NEFMP07197 AL356280.1-201ENST00000603614 379 ntBASIC3.22□□□□□ -1.89
NEFMP07197 MIR6895-201ENST00000613497 78 ntBASIC3.22□□□□□ -1.89
NEFMP07197 MIR7157-201ENST00000635801 60 ntBASIC3.22□□□□□ -1.89
NEFMP07197 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
NEFMP07197 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NEFMP07197 RNU6-235P-201ENST00000362644 107 ntBASIC3.21□□□□□ -1.9
NEFMP07197 RNU1-22P-201ENST00000363334 158 ntBASIC3.21□□□□□ -1.9
NEFMP07197 SNORA38-201ENST00000363946 132 ntBASIC3.21□□□□□ -1.9
NEFMP07197 Y_RNA.525-201ENST00000384570 113 ntBASIC3.21□□□□□ -1.9
NEFMP07197 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.21□□□□□ -1.9
NEFMP07197 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.21□□□□□ -1.9
NEFMP07197 RN7SL636P-201ENST00000497504 294 ntBASIC3.21□□□□□ -1.9
NEFMP07197 AC234781.5-201ENST00000508429 271 ntBASIC3.21□□□□□ -1.9
NEFMP07197 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.21□□□□□ -1.9
NEFMP07197 AC097462.1-201ENST00000514125 324 ntBASIC3.21□□□□□ -1.9
NEFMP07197 Y_RNA.709-201ENST00000516952 92 ntBASIC3.21□□□□□ -1.9
NEFMP07197 AL929325.1-201ENST00000603096 117 ntBASIC3.21□□□□□ -1.9
NEFMP07197 MIR6129-201ENST00000616087 109 ntBASIC3.21□□□□□ -1.9
NEFMP07197 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.21□□□□□ -1.9
NEFMP07197 Y_RNA.280-201ENST00000364765 112 ntBASIC3.2□□□□□ -1.9
NEFMP07197 Y_RNA.294-201ENST00000364916 102 ntBASIC3.2□□□□□ -1.9
NEFMP07197 RNU6-1336P-201ENST00000383886 109 ntBASIC3.2□□□□□ -1.9
NEFMP07197 RNU6-136P-201ENST00000384663 107 ntBASIC3.2□□□□□ -1.9
NEFMP07197 SNORA80E-201ENST00000384744 137 ntBASIC3.2□□□□□ -1.9
NEFMP07197 MIR144-201ENST00000384886 86 ntBASIC3.2□□□□□ -1.9
NEFMP07197 U6atac.2-201ENST00000408644 118 ntBASIC3.2□□□□□ -1.9
NEFMP07197 AL158147.1-201ENST00000443970 75 ntBASIC3.2□□□□□ -1.9
NEFMP07197 AC245102.2-201ENST00000448956 180 ntBASIC3.2□□□□□ -1.9
NEFMP07197 RPS29P21-201ENST00000496272 170 ntBASIC3.2□□□□□ -1.9
NEFMP07197 CYCTP-201ENST00000504253 315 ntBASIC3.2□□□□□ -1.9
NEFMP07197 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.2□□□□□ -1.9
NEFMP07197 MTND5P34-201ENST00000568888 325 ntBASIC3.2□□□□□ -1.9
NEFMP07197 RPL23AP91-201ENST00000569211 455 ntBASIC3.2□□□□□ -1.9
NEFMP07197 MIR4662B-201ENST00000579498 81 ntBASIC3.2□□□□□ -1.9
NEFMP07197 MIR4438-201ENST00000585271 93 ntBASIC3.2□□□□□ -1.9
NEFMP07197 MIR1291-201ENST00000627649 87 ntBASIC3.2□□□□□ -1.9
NEFMP07197 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NEFMP07197 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NEFMP07197 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.19□□□□□ -1.9
NEFMP07197 AL391516.1-201ENST00000554380 2449 ntBASIC3.19□□□□□ -1.9
NEFMP07197 SNORA63.4-201ENST00000362763 126 ntBASIC3.19□□□□□ -1.9
NEFMP07197 U8.1-201ENST00000362843 134 ntBASIC3.19□□□□□ -1.9
NEFMP07197 SNORD18B-201ENST00000365659 72 ntBASIC3.19□□□□□ -1.9
NEFMP07197 RPS4XP11-201ENST00000446897 772 ntBASIC3.19□□□□□ -1.9
NEFMP07197 HMGN2P18-201ENST00000450680 270 ntBASIC3.19□□□□□ -1.9
NEFMP07197 RNU7-172P-201ENST00000517125 64 ntBASIC3.19□□□□□ -1.9
NEFMP07197 RNA5SP490-201ENST00000517141 136 ntBASIC3.19□□□□□ -1.9
NEFMP07197 MIR3121-201ENST00000579680 77 ntBASIC3.19□□□□□ -1.9
NEFMP07197 AC105245.1-201ENST00000581934 244 ntBASIC3.19□□□□□ -1.9
NEFMP07197 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.19□□□□□ -1.9
NEFMP07197 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NEFMP07197 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEFMP07197 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NEFMP07197 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
NEFMP07197 Y_RNA.634-201ENST00000364811 113 ntBASIC3.18□□□□□ -1.9
NEFMP07197 RNU6-546P-201ENST00000383991 107 ntBASIC3.18□□□□□ -1.9
NEFMP07197 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.18□□□□□ -1.9
NEFMP07197 SNORD11-201ENST00000459124 84 ntBASIC3.18□□□□□ -1.9
NEFMP07197 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NEFMP07197 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEFMP07197 AC080128.1-201ENST00000474389 1917 ntBASIC3.17□□□□□ -1.9
NEFMP07197 RNU6-755P-201ENST00000364400 103 ntBASIC3.17□□□□□ -1.9
NEFMP07197 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NEFMP07197 AL603914.1-201ENST00000401964 204 ntBASIC3.17□□□□□ -1.9
NEFMP07197 AC026436.1-201ENST00000510537 270 ntBASIC3.17□□□□□ -1.9
NEFMP07197 RNU6-589P-201ENST00000516485 107 ntBASIC3.17□□□□□ -1.9
NEFMP07197 RNU6-965P-201ENST00000516721 96 ntBASIC3.17□□□□□ -1.9
NEFMP07197 SCARNA3-201ENST00000517097 143 ntBASIC3.17□□□□□ -1.9
NEFMP07197 MIR5694-201ENST00000581190 76 ntBASIC3.17□□□□□ -1.9
NEFMP07197 MIR1248-201ENST00000629190 106 ntBASIC3.17□□□□□ -1.9
NEFMP07197 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NEFMP07197 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEFMP07197 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEFMP07197 Y_RNA.796-201ENST00000364268 102 ntBASIC3.16□□□□□ -1.9
NEFMP07197 Y_RNA.799-201ENST00000364992 102 ntBASIC3.16□□□□□ -1.9
NEFMP07197 RNU6-1138P-201ENST00000365359 106 ntBASIC3.16□□□□□ -1.9
NEFMP07197 MIR562-201ENST00000384894 95 ntBASIC3.16□□□□□ -1.9
NEFMP07197 RNU2-32P-201ENST00000411193 191 ntBASIC3.16□□□□□ -1.9
NEFMP07197 RNU5E-3P-201ENST00000515913 68 ntBASIC3.16□□□□□ -1.9
NEFMP07197 SNORA4.4-201ENST00000515921 135 ntBASIC3.16□□□□□ -1.9
NEFMP07197 AC011604.1-201ENST00000545978 196 ntBASIC3.16□□□□□ -1.9
NEFMP07197 AC133485.4-201ENST00000561835 220 ntBASIC3.16□□□□□ -1.9
NEFMP07197 AC138907.4-201ENST00000570107 226 ntBASIC3.16□□□□□ -1.9
NEFMP07197 MIR3124-201ENST00000582636 67 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms