Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 RNU6-699P-201ENST00000517081 110 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 AC022616.4-201ENST00000522985 181 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 U6atac.1-201ENST00000616025 117 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
RAB3DO95716 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.57□□□□□ -2.32
RAB3DO95716 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
RAB3DO95716 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RAB3DO95716 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RAB3DO95716 Y_RNA.148-201ENST00000363557 117 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 RNU6-1175P-201ENST00000365200 107 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 Y_RNA.368-201ENST00000365547 113 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 MIR628-201ENST00000385229 95 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 MCFD2P1-201ENST00000417812 300 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 COX6CP6-201ENST00000490840 228 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 RPL23AP94-201ENST00000512518 302 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
RAB3DO95716 MIR3973-201ENST00000579824 107 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 AC113139.1-201ENST00000605049 239 ntBASIC0.56□□□□□ -2.32
RAB3DO95716 AC134026.1-201ENST00000623249 2239 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 RNU6-654P-201ENST00000364373 107 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 SNORD28B-201ENST00000390993 75 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 AL590004.1-201ENST00000405321 300 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.55□□□□□ -2.32
RAB3DO95716 RNU7-43P-201ENST00000516554 64 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 RN7SKP295-201ENST00000517264 153 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 AC036111.3-201ENST00000526389 112 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.55□□□□□ -2.32
RAB3DO95716 MIR3945-201ENST00000581853 98 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 AC104465.1-201ENST00000611365 139 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
RAB3DO95716 Y_RNA.27-201ENST00000362540 103 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 RNU6-490P-201ENST00000362985 107 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 Y_RNA.230-201ENST00000364348 109 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 Y_RNA.310-201ENST00000365063 113 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 RNU6-53P-201ENST00000365367 106 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 SNORD116-29-201ENST00000384516 83 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 Y_RNA.570-201ENST00000384750 101 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 FGF7P8-201ENST00000402994 292 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 MIR1302-7-201ENST00000408841 72 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 AC113410.1-201ENST00000505029 247 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.54□□□□□ -2.32
RAB3DO95716 AC006600.1-201ENST00000572529 153 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 MIR548AR-201ENST00000582191 57 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 POLR3GP1-201ENST00000594073 261 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 DEFB117-201ENST00000602356 141 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 AC108706.1-201ENST00000611053 297 ntBASIC0.54□□□□□ -2.32
RAB3DO95716 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
RAB3DO95716 MIR378A-201ENST00000362177 66 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 SNORD81.1-201ENST00000363064 77 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 RNA5SP48-201ENST00000363969 126 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 Y_RNA.341-201ENST00000365341 102 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 MIR570-201ENST00000384917 97 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 RNA5SP95-201ENST00000410319 137 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.53□□□□□ -2.32
RAB3DO95716 AC004941.2-201ENST00000427009 228 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.53□□□□□ -2.32
RAB3DO95716 AC091951.2-201ENST00000500762 203 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 AP000942.3-201ENST00000603702 160 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 RBM11P1-201ENST00000604951 799 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 AL355073.2-201ENST00000612106 557 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 MIR6516-201ENST00000630554 81 ntBASIC0.53□□□□□ -2.32
RAB3DO95716 Y_RNA.259-201ENST00000364619 101 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 U8.7-201ENST00000364940 136 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 RNU6-1323P-201ENST00000384025 107 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 MIR520E-201ENST00000384867 87 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 MIR15B-201ENST00000385045 98 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AF228730.4-201ENST00000421457 183 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.52□□□□□ -2.33
RAB3DO95716 HMGN2P32-201ENST00000444648 269 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AL392103.1-201ENST00000447000 198 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AC005042.3-201ENST00000453230 174 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 U7.7-201ENST00000459276 60 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.52□□□□□ -2.33
RAB3DO95716 RNU6-277P-201ENST00000516272 106 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 RNU6-911P-201ENST00000516523 104 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AC024405.2-202ENST00000532731 184 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 MIR3145-201ENST00000580727 82 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 MIR4423-201ENST00000580922 80 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AC012433.1-201ENST00000588916 398 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AL590095.2-201ENST00000604136 117 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AC025253.1-201ENST00000613623 543 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 AC008133.2-201ENST00000624540 351 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.52□□□□□ -2.33
RAB3DO95716 MIR4251-201ENST00000635819 61 ntBASIC0.52□□□□□ -2.33
RAB3DO95716 SNORD14E-201ENST00000364009 85 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 Y_RNA.203-201ENST00000364106 102 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 Y_RNA.331-201ENST00000365267 102 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 Y_RNA.390-201ENST00000383932 102 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 MIR764-201ENST00000390811 85 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 RNY4P36-201ENST00000391116 96 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 AC138393.2-201ENST00000414742 246 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 AC098614.3-201ENST00000438957 440 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 AC099799.1-201ENST00000439809 192 ntBASIC0.51□□□□□ -2.33
RAB3DO95716 SNORA59A-201ENST00000459326 152 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms