Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -2
CNOT4O95628 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
CNOT4O95628 SNORA63.4-201ENST00000362763 126 ntBASIC2.58□□□□□ -2
CNOT4O95628 Y_RNA.332-201ENST00000365271 113 ntBASIC2.58□□□□□ -2
CNOT4O95628 SNORD23.1-201ENST00000408212 104 ntBASIC2.58□□□□□ -2
CNOT4O95628 MIR1253-201ENST00000408273 105 ntBASIC2.58□□□□□ -2
CNOT4O95628 MLLT10P1-201ENST00000418346 262 ntBASIC2.58□□□□□ -2
CNOT4O95628 AL139132.1-201ENST00000431587 344 ntBASIC2.58□□□□□ -2
CNOT4O95628 AL158147.1-201ENST00000443970 75 ntBASIC2.58□□□□□ -2
CNOT4O95628 AC093259.1-201ENST00000509755 300 ntBASIC2.58□□□□□ -2
CNOT4O95628 RNU6-126P-201ENST00000516685 103 ntBASIC2.58□□□□□ -2
CNOT4O95628 RNU7-193P-201ENST00000516723 65 ntBASIC2.58□□□□□ -2
CNOT4O95628 RNU7-149P-201ENST00000516739 59 ntBASIC2.58□□□□□ -2
CNOT4O95628 NDUFA5P6-201ENST00000542110 379 ntBASIC2.58□□□□□ -2
CNOT4O95628 MTND5P34-201ENST00000568888 325 ntBASIC2.58□□□□□ -2
CNOT4O95628 MIR4662B-201ENST00000579498 81 ntBASIC2.58□□□□□ -2
CNOT4O95628 AC078899.2-201ENST00000595282 212 ntBASIC2.58□□□□□ -2
CNOT4O95628 U6.73-201ENST00000619194 103 ntBASIC2.58□□□□□ -2
CNOT4O95628 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
CNOT4O95628 U6.95-201ENST00000636931 70 ntBASIC2.58□□□□□ -2
CNOT4O95628 ZNF658B-202ENST00000615961 3375 ntBASIC2.58□□□□□ -2
CNOT4O95628 RNU6-1138P-201ENST00000365359 106 ntBASIC2.57□□□□□ -2
CNOT4O95628 SNORD18B-201ENST00000365659 72 ntBASIC2.57□□□□□ -2
CNOT4O95628 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.57□□□□□ -2
CNOT4O95628 RNA5SP184-201ENST00000411071 108 ntBASIC2.57□□□□□ -2
CNOT4O95628 OR9P1P-201ENST00000496431 281 ntBASIC2.57□□□□□ -2
CNOT4O95628 SCGB1D5P-201ENST00000515134 247 ntBASIC2.57□□□□□ -2
CNOT4O95628 RNU6-991P-201ENST00000516168 107 ntBASIC2.57□□□□□ -2
CNOT4O95628 Y_RNA.709-201ENST00000516952 92 ntBASIC2.57□□□□□ -2
CNOT4O95628 RNU6-1096P-201ENST00000517089 102 ntBASIC2.57□□□□□ -2
CNOT4O95628 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
CNOT4O95628 MIR3121-201ENST00000579680 77 ntBASIC2.57□□□□□ -2
CNOT4O95628 MIR4435-1-201ENST00000582552 80 ntBASIC2.57□□□□□ -2
CNOT4O95628 U2.20-201ENST00000613956 192 ntBASIC2.57□□□□□ -2
CNOT4O95628 JPX_2.1-201ENST00000614161 69 ntBASIC2.57□□□□□ -2
CNOT4O95628 Pinc.1-201ENST00000616452 154 ntBASIC2.57□□□□□ -2
CNOT4O95628 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.57□□□□□ -2
CNOT4O95628 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.57□□□□□ -2
CNOT4O95628 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CNOT4O95628 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CNOT4O95628 SNORD115-3-201ENST00000363100 82 ntBASIC2.56□□□□□ -2
CNOT4O95628 Y_RNA.114-201ENST00000363265 113 ntBASIC2.56□□□□□ -2
CNOT4O95628 MIR592-201ENST00000384959 97 ntBASIC2.56□□□□□ -2
CNOT4O95628 MIR520G-201ENST00000385064 90 ntBASIC2.56□□□□□ -2
CNOT4O95628 SNORA40.5-201ENST00000391061 128 ntBASIC2.56□□□□□ -2
CNOT4O95628 AC105272.1-201ENST00000438604 198 ntBASIC2.56□□□□□ -2
CNOT4O95628 AL135938.1-201ENST00000443141 297 ntBASIC2.56□□□□□ -2
CNOT4O95628 Y_RNA.690-201ENST00000516603 95 ntBASIC2.56□□□□□ -2
CNOT4O95628 AC133485.4-201ENST00000561835 220 ntBASIC2.56□□□□□ -2
CNOT4O95628 AC138907.4-201ENST00000570107 226 ntBASIC2.56□□□□□ -2
CNOT4O95628 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
CNOT4O95628 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CNOT4O95628 AL603914.1-201ENST00000401964 204 ntBASIC2.55□□□□□ -2
CNOT4O95628 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.55□□□□□ -2
CNOT4O95628 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.55□□□□□ -2
CNOT4O95628 HMGN2P34-201ENST00000437647 269 ntBASIC2.55□□□□□ -2
CNOT4O95628 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.55□□□□□ -2
CNOT4O95628 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.55□□□□□ -2
CNOT4O95628 CYCTP-201ENST00000504253 315 ntBASIC2.55□□□□□ -2
CNOT4O95628 RNU6-1146P-201ENST00000516282 102 ntBASIC2.55□□□□□ -2
CNOT4O95628 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
CNOT4O95628 RNA5SP137-201ENST00000516833 135 ntBASIC2.55□□□□□ -2
CNOT4O95628 RNU2-60P-201ENST00000517290 128 ntBASIC2.55□□□□□ -2
CNOT4O95628 MIR4529-201ENST00000578110 78 ntBASIC2.55□□□□□ -2
CNOT4O95628 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
CNOT4O95628 AC073413.2-201ENST00000604332 360 ntBASIC2.55□□□□□ -2
CNOT4O95628 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
CNOT4O95628 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CNOT4O95628 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.54□□□□□ -2
CNOT4O95628 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
CNOT4O95628 RNU4-82P-201ENST00000362443 140 ntBASIC2.54□□□□□ -2
CNOT4O95628 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
CNOT4O95628 Y_RNA.486-201ENST00000384398 107 ntBASIC2.54□□□□□ -2
CNOT4O95628 Y_RNA.621-201ENST00000411065 96 ntBASIC2.54□□□□□ -2
CNOT4O95628 AC060773.1-201ENST00000421698 310 ntBASIC2.54□□□□□ -2
CNOT4O95628 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.54□□□□□ -2
CNOT4O95628 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
CNOT4O95628 SNORD33.1-201ENST00000516213 88 ntBASIC2.54□□□□□ -2
CNOT4O95628 SNORA18.4-201ENST00000516440 124 ntBASIC2.54□□□□□ -2
CNOT4O95628 RNU6-589P-201ENST00000516485 107 ntBASIC2.54□□□□□ -2
CNOT4O95628 RNU6-1061P-201ENST00000516530 99 ntBASIC2.54□□□□□ -2
CNOT4O95628 RNU6-365P-201ENST00000517113 106 ntBASIC2.54□□□□□ -2
CNOT4O95628 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
CNOT4O95628 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
CNOT4O95628 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
CNOT4O95628 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CNOT4O95628 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.53□□□□□ -2
CNOT4O95628 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CNOT4O95628 RNU1-96P-201ENST00000364163 162 ntBASIC2.53□□□□□ -2
CNOT4O95628 MIR624-201ENST00000385217 97 ntBASIC2.53□□□□□ -2
CNOT4O95628 RNU6-1186P-201ENST00000410429 97 ntBASIC2.53□□□□□ -2
CNOT4O95628 RNU2-48P-201ENST00000410694 191 ntBASIC2.53□□□□□ -2
CNOT4O95628 RNA5SP127-201ENST00000411051 133 ntBASIC2.53□□□□□ -2
CNOT4O95628 SRIP3-201ENST00000413200 219 ntBASIC2.53□□□□□ -2
CNOT4O95628 AP004217.1-201ENST00000480579 346 ntBASIC2.53□□□□□ -2
CNOT4O95628 RNU5E-3P-201ENST00000515913 68 ntBASIC2.53□□□□□ -2
CNOT4O95628 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.53□□□□□ -2
CNOT4O95628 AL365205.2-201ENST00000594586 68 ntBASIC2.53□□□□□ -2
CNOT4O95628 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
CNOT4O95628 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms