Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MIR3942-201ENST00000585264 109 ntBASIC0.16□□□□□ -2.38
SNX4O95219 AC006380.1-201ENST00000603598 186 ntBASIC0.16□□□□□ -2.38
SNX4O95219 AC063944.3-201ENST00000609969 533 ntBASIC0.16□□□□□ -2.38
SNX4O95219 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
SNX4O95219 SNORD115-30-201ENST00000364117 82 ntBASIC0.15□□□□□ -2.39
SNX4O95219 SNORD38C-201ENST00000384381 69 ntBASIC0.15□□□□□ -2.39
SNX4O95219 MIR520F-201ENST00000384824 87 ntBASIC0.15□□□□□ -2.39
SNX4O95219 MT-TN-201ENST00000387400 73 ntBASIC0.15□□□□□ -2.39
SNX4O95219 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.15□□□□□ -2.39
SNX4O95219 MTCO3P10-201ENST00000455912 772 ntBASIC0.15□□□□□ -2.39
SNX4O95219 RNU2-12P-201ENST00000517216 168 ntBASIC0.15□□□□□ -2.39
SNX4O95219 AC105029.1-201ENST00000520250 669 ntBASIC0.15□□□□□ -2.39
SNX4O95219 AC012433.1-201ENST00000588916 398 ntBASIC0.15□□□□□ -2.39
SNX4O95219 Z99129.1-201ENST00000612510 255 ntBASIC0.15□□□□□ -2.39
SNX4O95219 MIR6128-201ENST00000615528 109 ntBASIC0.15□□□□□ -2.39
SNX4O95219 MIR377-201ENST00000362145 69 ntBASIC0.14□□□□□ -2.39
SNX4O95219 SNORD50B-201ENST00000364995 70 ntBASIC0.14□□□□□ -2.39
SNX4O95219 Y_RNA.466-201ENST00000384294 113 ntBASIC0.14□□□□□ -2.39
SNX4O95219 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
SNX4O95219 RNU6-780P-201ENST00000391030 104 ntBASIC0.14□□□□□ -2.39
SNX4O95219 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.14□□□□□ -2.39
SNX4O95219 MIR3612-201ENST00000579753 87 ntBASIC0.14□□□□□ -2.39
SNX4O95219 MIR4514-201ENST00000581410 57 ntBASIC0.14□□□□□ -2.39
SNX4O95219 MIR548AR-201ENST00000582191 57 ntBASIC0.14□□□□□ -2.39
SNX4O95219 AC023932.2-201ENST00000603176 175 ntBASIC0.14□□□□□ -2.39
SNX4O95219 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.14□□□□□ -2.39
SNX4O95219 MIR3662-201ENST00000637030 95 ntBASIC0.14□□□□□ -2.39
SNX4O95219 SNORD71-201ENST00000411292 86 ntBASIC0.13□□□□□ -2.39
SNX4O95219 AC009161.1-201ENST00000417306 376 ntBASIC0.13□□□□□ -2.39
SNX4O95219 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.13□□□□□ -2.39
SNX4O95219 MTND1P17-201ENST00000448961 204 ntBASIC0.13□□□□□ -2.39
SNX4O95219 RNU6-273P-201ENST00000516937 96 ntBASIC0.13□□□□□ -2.39
SNX4O95219 MIR103A1-201ENST00000362165 78 ntBASIC0.12□□□□□ -2.39
SNX4O95219 Y_RNA.38-201ENST00000362617 102 ntBASIC0.12□□□□□ -2.39
SNX4O95219 Y_RNA.148-201ENST00000363557 117 ntBASIC0.12□□□□□ -2.39
SNX4O95219 SNORD14E-201ENST00000364009 85 ntBASIC0.12□□□□□ -2.39
SNX4O95219 Y_RNA.368-201ENST00000365547 113 ntBASIC0.12□□□□□ -2.39
SNX4O95219 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SNX4O95219 AL139396.1-201ENST00000421137 167 ntBASIC0.12□□□□□ -2.39
SNX4O95219 SNRPGP10-201ENST00000432323 225 ntBASIC0.12□□□□□ -2.39
SNX4O95219 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.12□□□□□ -2.39
SNX4O95219 RNU6-329P-201ENST00000459618 107 ntBASIC0.12□□□□□ -2.39
SNX4O95219 SNORA25.10-201ENST00000515926 124 ntBASIC0.12□□□□□ -2.39
SNX4O95219 RNU6-566P-201ENST00000516790 107 ntBASIC0.12□□□□□ -2.39
SNX4O95219 AC022523.2-201ENST00000561045 150 ntBASIC0.12□□□□□ -2.39
SNX4O95219 AC245008.1-201ENST00000608123 476 ntBASIC0.12□□□□□ -2.39
SNX4O95219 AC004467.1-201ENST00000615678 330 ntBASIC0.12□□□□□ -2.39
SNX4O95219 RNU6-369P-201ENST00000362515 102 ntBASIC0.11□□□□□ -2.39
SNX4O95219 Y_RNA.205-201ENST00000364128 113 ntBASIC0.11□□□□□ -2.39
SNX4O95219 RNU4-67P-201ENST00000364569 141 ntBASIC0.11□□□□□ -2.39
SNX4O95219 RNU6-580P-201ENST00000365159 107 ntBASIC0.11□□□□□ -2.39
SNX4O95219 RNU6-318P-201ENST00000384283 103 ntBASIC0.11□□□□□ -2.39
SNX4O95219 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SNX4O95219 SNORA25.12-201ENST00000516202 82 ntBASIC0.11□□□□□ -2.39
SNX4O95219 MIR2355-201ENST00000517199 87 ntBASIC0.11□□□□□ -2.39
SNX4O95219 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.11□□□□□ -2.39
SNX4O95219 MIR4431-201ENST00000579990 94 ntBASIC0.11□□□□□ -2.39
SNX4O95219 AP000753.3-201ENST00000604083 169 ntBASIC0.11□□□□□ -2.39
SNX4O95219 AC005972.2-201ENST00000604690 348 ntBASIC0.11□□□□□ -2.39
SNX4O95219 RBM11P1-201ENST00000604951 799 ntBASIC0.11□□□□□ -2.39
SNX4O95219 AC005014.2-201ENST00000607795 599 ntBASIC0.11□□□□□ -2.39
SNX4O95219 MIR8087-201ENST00000612745 78 ntBASIC0.11□□□□□ -2.39
SNX4O95219 AC240442.1-201ENST00000616055 283 ntBASIC0.11□□□□□ -2.39
SNX4O95219 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.11□□□□□ -2.39
SNX4O95219 RNU6-934P-201ENST00000365154 107 ntBASIC0.1□□□□□ -2.39
SNX4O95219 Y_RNA.358-201ENST00000365491 99 ntBASIC0.1□□□□□ -2.39
SNX4O95219 SNORA72-201ENST00000384339 132 ntBASIC0.1□□□□□ -2.39
SNX4O95219 MIR518A1-201ENST00000385068 85 ntBASIC0.1□□□□□ -2.39
SNX4O95219 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
SNX4O95219 RNU2-54P-201ENST00000410299 190 ntBASIC0.1□□□□□ -2.39
SNX4O95219 SNORD12B-201ENST00000410433 91 ntBASIC0.1□□□□□ -2.39
SNX4O95219 MTND2P22-201ENST00000444325 1033 ntBASIC0.1□□□□□ -2.39
SNX4O95219 MTND1P1-201ENST00000445453 368 ntBASIC0.1□□□□□ -2.39
SNX4O95219 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.1□□□□□ -2.39
SNX4O95219 SNRPGP12-201ENST00000449481 213 ntBASIC0.1□□□□□ -2.39
SNX4O95219 AP000770.2-201ENST00000623694 100 ntBASIC0.1□□□□□ -2.39
SNX4O95219 SNORD44.1-201ENST00000363202 61 ntBASIC0.09□□□□□ -2.4
SNX4O95219 RNA5SP62-201ENST00000363457 110 ntBASIC0.09□□□□□ -2.4
SNX4O95219 Y_RNA.476-201ENST00000384347 108 ntBASIC0.09□□□□□ -2.4
SNX4O95219 SNORD28B-201ENST00000390993 75 ntBASIC0.09□□□□□ -2.4
SNX4O95219 AL031003.1-201ENST00000404229 172 ntBASIC0.09□□□□□ -2.4
SNX4O95219 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
SNX4O95219 AC074085.1-201ENST00000413598 418 ntBASIC0.09□□□□□ -2.4
SNX4O95219 AL358176.2-201ENST00000425769 204 ntBASIC0.09□□□□□ -2.4
SNX4O95219 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.09□□□□□ -2.4
SNX4O95219 AC087685.1-201ENST00000587507 141 ntBASIC0.09□□□□□ -2.4
SNX4O95219 RNU6-874P-201ENST00000362390 105 ntBASIC0.08□□□□□ -2.4
SNX4O95219 SNORA51.10-201ENST00000384418 136 ntBASIC0.08□□□□□ -2.4
SNX4O95219 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.08□□□□□ -2.4
SNX4O95219 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.08□□□□□ -2.4
SNX4O95219 RNU6-830P-201ENST00000516353 107 ntBASIC0.08□□□□□ -2.4
SNX4O95219 RNU6-1088P-201ENST00000516850 104 ntBASIC0.08□□□□□ -2.4
SNX4O95219 RNU6-1314P-201ENST00000517139 104 ntBASIC0.08□□□□□ -2.4
SNX4O95219 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.08□□□□□ -2.4
SNX4O95219 MIR6779-201ENST00000617283 64 ntBASIC0.08□□□□□ -2.4
SNX4O95219 uc_338.16-201ENST00000621804 95 ntBASIC0.08□□□□□ -2.4
SNX4O95219 AC090617.10-201ENST00000624308 134 ntBASIC0.08□□□□□ -2.4
SNX4O95219 AC024614.3-201ENST00000637860 256 ntBASIC0.08□□□□□ -2.4
SNX4O95219 SNORD116-9-201ENST00000384000 95 ntBASIC0.07□□□□□ -2.4
SNX4O95219 SNORD116-3-201ENST00000384287 95 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms