Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AL160236.1-201ENST00000556317 195 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 MIR5094-201ENST00000578766 85 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 AC091895.1-201ENST00000624494 256 ntBASIC2.99□□□□□ -1.93
PRPF40AO75400 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.98□□□□□ -1.93
PRPF40AO75400 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PRPF40AO75400 RNU6-1019P-201ENST00000364424 107 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 RNU6-818P-201ENST00000364837 108 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 Y_RNA.500-201ENST00000384466 111 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 RNU6-768P-201ENST00000384683 107 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 MIR9-1-201ENST00000385198 89 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 RPL30P13-201ENST00000418873 348 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.98□□□□□ -1.93
PRPF40AO75400 UBE2DNL-203ENST00000474922 222 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 SNORA25.12-201ENST00000516202 82 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 AC079600.2-201ENST00000550076 130 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 MIR3646-201ENST00000578301 84 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 AL591926.4-201ENST00000616895 298 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 CTSLP2-204ENST00000629029 392 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 ZNF702P-202ENST00000434269 1966 ntBASIC2.98□□□□□ -1.93
PRPF40AO75400 RNU6-1138P-201ENST00000365359 106 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 RNU6-131P-201ENST00000391144 107 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 AC069257.2-201ENST00000441819 155 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.97□□□□□ -1.93
PRPF40AO75400 RNU6-426P-201ENST00000516464 97 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 AC112693.2-201ENST00000556538 232 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 MIR4319-201ENST00000577285 85 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 MIR5092-201ENST00000583139 88 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 AC006023.1-201ENST00000603944 259 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 AC022217.4-201ENST00000604389 163 ntBASIC2.97□□□□□ -1.93
PRPF40AO75400 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PRPF40AO75400 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PRPF40AO75400 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PRPF40AO75400 SNORD68-201ENST00000363214 84 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 Y_RNA.242-201ENST00000364473 110 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 Y_RNA.265-201ENST00000364677 108 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 Y_RNA.568-201ENST00000384742 113 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 MIR569-201ENST00000385228 96 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 MIR802-201ENST00000390235 94 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 RNA5SP109-201ENST00000391010 116 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 HMGN2P39-201ENST00000398005 273 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 HMGN2P3-201ENST00000433603 273 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 HMGN2P5-201ENST00000436882 273 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 RPS12P2-201ENST00000439728 269 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 NDUFA4P2-201ENST00000489989 244 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 SNORA31.15-201ENST00000516771 132 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 AC084364.2-201ENST00000546924 395 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.96□□□□□ -1.94
PRPF40AO75400 AC087685.1-201ENST00000587507 141 ntBASIC2.96□□□□□ -1.94
PRPF40AO75400 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF40AO75400 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PRPF40AO75400 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF40AO75400 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PRPF40AO75400 MIR1283-2-201ENST00000408621 87 ntBASIC2.95□□□□□ -1.94
PRPF40AO75400 RNA5SP184-201ENST00000411071 108 ntBASIC2.95□□□□□ -1.94
PRPF40AO75400 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF40AO75400 RNA5SP402-201ENST00000517148 110 ntBASIC2.95□□□□□ -1.94
PRPF40AO75400 SNORD14A-201ENST00000606526 91 ntBASIC2.95□□□□□ -1.94
PRPF40AO75400 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.95□□□□□ -1.94
PRPF40AO75400 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF40AO75400 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF40AO75400 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRPF40AO75400 Y_RNA.634-201ENST00000364811 113 ntBASIC2.94□□□□□ -1.94
PRPF40AO75400 SNORA75.5-201ENST00000391291 81 ntBASIC2.94□□□□□ -1.94
PRPF40AO75400 AL606517.2-201ENST00000442855 241 ntBASIC2.94□□□□□ -1.94
PRPF40AO75400 MRPS17P9-201ENST00000511924 393 ntBASIC2.94□□□□□ -1.94
PRPF40AO75400 RNU6-365P-201ENST00000517113 106 ntBASIC2.94□□□□□ -1.94
PRPF40AO75400 RPL12P50-201ENST00000603116 116 ntBASIC2.94□□□□□ -1.94
PRPF40AO75400 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRPF40AO75400 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRPF40AO75400 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF40AO75400 Y_RNA.91-201ENST00000363042 107 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 SNORA25.7-201ENST00000364375 127 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 RNU6-597P-201ENST00000365620 102 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 RNA5SP482-201ENST00000391269 118 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 RNU2-52P-201ENST00000410680 190 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 AC245047.4-201ENST00000433189 144 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 SNORD109B-201ENST00000458961 67 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 SNORD109A-201ENST00000459128 67 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 RNU7-28P-201ENST00000516759 62 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 AC120024.3-201ENST00000603167 156 ntBASIC2.93□□□□□ -1.94
PRPF40AO75400 AC062016.1-201ENST00000355719 319 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 Y_RNA.486-201ENST00000384398 107 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 MIR522-201ENST00000385071 87 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.92□□□□□ -1.94
PRPF40AO75400 AL606753.1-201ENST00000427435 87 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 SUMO1P4-201ENST00000429430 302 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 AC108938.1-201ENST00000451204 136 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 AC090142.3-201ENST00000519012 385 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 AC008507.4-201ENST00000585464 127 ntBASIC2.92□□□□□ -1.94
PRPF40AO75400 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRPF40AO75400 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.91□□□□□ -1.94
PRPF40AO75400 FTH1P12-201ENST00000432137 551 ntBASIC2.91□□□□□ -1.94
PRPF40AO75400 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.91□□□□□ -1.94
PRPF40AO75400 RNA5SP272-201ENST00000516095 111 ntBASIC2.91□□□□□ -1.94
PRPF40AO75400 MIR5194-201ENST00000582634 120 ntBASIC2.91□□□□□ -1.94
PRPF40AO75400 AC097639.2-201ENST00000603159 172 ntBASIC2.91□□□□□ -1.94
PRPF40AO75400 AC010332.2-201ENST00000613083 1904 ntBASIC2.9□□□□□ -1.95
PRPF40AO75400 RNU6-1084P-201ENST00000362498 107 ntBASIC2.9□□□□□ -1.95
PRPF40AO75400 RNU6-859P-201ENST00000362728 107 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms