Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 MIR520F-201ENST00000384824 87 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-1148P-201ENST00000410992 104 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 RNU7-87P-201ENST00000459343 62 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 AC105029.1-201ENST00000520250 669 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 MTND2P38-201ENST00000522536 667 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 OSBPL9P5-201ENST00000542581 171 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 MIR1273G-201ENST00000577677 100 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 AC023932.2-201ENST00000603176 175 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 RBM11P1-201ENST00000604951 799 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 RN7SKP299-201ENST00000606679 301 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 Z99129.1-201ENST00000612510 255 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 AC092634.7-201ENST00000621022 103 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 AC090617.10-201ENST00000624308 134 ntBASIC0.07□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-580P-201ENST00000365159 107 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 MTND1P17-201ENST00000448961 204 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 SNORD5.1-201ENST00000458800 75 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 AC093534.1-201ENST00000504977 132 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-864P-201ENST00000516256 108 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 MIR548AO-201ENST00000579992 96 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 AC018638.8-201ENST00000588755 281 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 MIR6128-201ENST00000615528 109 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 AC091925.1-201ENST00000623204 462 ntBASIC0.06□□□□□ -2.4
TRAV41A0A0B4J266 RNA5SP62-201ENST00000363457 110 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 RNU4-45P-201ENST00000365469 141 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 Y_RNA.358-201ENST00000365491 99 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 MIR518A1-201ENST00000385068 85 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-205P-201ENST00000390858 107 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 AL031003.1-201ENST00000404229 172 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 RNU2-54P-201ENST00000410299 190 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 HMGN2P32-201ENST00000444648 269 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-977P-201ENST00000516411 103 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-1012P-201ENST00000516606 109 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 MIR4804-201ENST00000581683 73 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 NBR2-204ENST00000587322 63 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 AC024614.3-201ENST00000637860 256 ntBASIC0.05□□□□□ -2.4
TRAV41A0A0B4J266 MIR377-201ENST00000362145 69 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-961P-201ENST00000363893 105 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-396P-201ENST00000365369 105 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 Y_RNA.476-201ENST00000384347 108 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-831P-201ENST00000384548 107 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-679P-201ENST00000391003 106 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-131P-201ENST00000391144 107 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-863P-201ENST00000515989 104 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 AC022523.2-201ENST00000561045 150 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 MIR4771-2-201ENST00000577758 74 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 MIR4771-1-201ENST00000582617 74 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 LARP7P1-201ENST00000605576 316 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 AC020891.4-201ENST00000605745 93 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 SNORA25.18-201ENST00000607153 114 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 AC004467.1-201ENST00000615678 330 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 MIR3974-201ENST00000637126 96 ntBASIC0.04□□□□□ -2.4
TRAV41A0A0B4J266 MIR330-201ENST00000362196 94 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 Y_RNA.101-201ENST00000363154 102 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-1090P-201ENST00000364065 94 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-934P-201ENST00000365154 107 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 Y_RNA.376-201ENST00000365638 108 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-815P-201ENST00000384080 113 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-125P-201ENST00000384505 107 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 SNORD12B-201ENST00000410433 91 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 SNORA40.8-201ENST00000411034 126 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU2-61P-201ENST00000411069 191 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 AL353997.1-201ENST00000432936 108 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 SNRPGP14-201ENST00000435400 219 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 AC011352.1-201ENST00000512300 793 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 SNORA25.12-201ENST00000516202 82 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-966P-201ENST00000516479 104 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU1-54P-201ENST00000517181 120 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 AC005730.3-201ENST00000583067 366 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 uc_338.6-201ENST00000613544 171 ntBASIC0.03□□□□□ -2.4
TRAV41A0A0B4J266 RNU6-1301P-201ENST00000362724 104 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 SNORD114-26-201ENST00000363543 72 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 Y_RNA.370-201ENST00000365589 108 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 MT-TN-201ENST00000387400 73 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 BTF3P11-201ENST00000426582 477 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 UBE2V1P7-201ENST00000446395 340 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 RNU7-56P-201ENST00000458744 62 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 HMGN1P10-201ENST00000474557 553 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 AC116353.2-201ENST00000505332 712 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 AC026782.1-201ENST00000512952 449 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 RNU6-408P-201ENST00000515910 100 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 RNU6-566P-201ENST00000516790 107 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 RNA5SP480-201ENST00000516840 109 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 RNA5SP94-201ENST00000516917 108 ntBASIC0.02□□□□□ -2.41
TRAV41A0A0B4J266 RNU6-1314P-201ENST00000517139 104 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms