Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC116353.2-201ENST00000505332 712 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 RNU6-408P-201ENST00000515910 100 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 SNORA25.10-201ENST00000515926 124 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 RN7SKP164-201ENST00000516138 266 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 MTND4LP26-201ENST00000518144 282 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AC109810.1-201ENST00000534066 224 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.5□□□□□ -2.33
LRRC42Q9Y546 AC004467.1-201ENST00000615678 330 ntBASIC0.5□□□□□ -2.33
LRRC42Q9Y546 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.253-201ENST00000364562 112 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 RNU1-93P-201ENST00000364704 169 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.318-201ENST00000365131 97 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 AL031003.1-201ENST00000404229 172 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 MIR1277-201ENST00000408536 78 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.49□□□□□ -2.33
LRRC42Q9Y546 AC113410.1-201ENST00000505029 247 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 AC105313.1-201ENST00000509121 353 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 MIR2355-201ENST00000517199 87 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 AC011604.1-201ENST00000545978 196 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 AC005899.2-201ENST00000584353 90 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.49□□□□□ -2.33
LRRC42Q9Y546 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 MIR6767-201ENST00000637302 66 ntBASIC0.49□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.101-201ENST00000363154 102 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 Y_RNA.172-201ENST00000363765 102 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 RNU6-99P-201ENST00000364721 107 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 SNORD14.1-201ENST00000365609 90 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 RNU6-1215P-201ENST00000384441 102 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 SNORD116-4-201ENST00000384733 96 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 MIR508-201ENST00000384857 115 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 MIR520C-201ENST00000385005 87 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 MIR522-201ENST00000385071 87 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 MIR136-201ENST00000385207 82 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 RNU2-61P-201ENST00000411069 191 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 MIR2053-201ENST00000459295 91 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 AC011352.1-201ENST00000512300 793 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 RNU6-718P-201ENST00000516166 105 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 AF235103.2-201ENST00000525753 346 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 MIR4764-201ENST00000580680 88 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 AC087588.2-201ENST00000617667 426 ntBASIC0.48□□□□□ -2.33
LRRC42Q9Y546 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.48□□□□□ -2.33
LRRC42Q9Y546 RNA5SP48-201ENST00000363969 126 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 SNORA75.4-201ENST00000391278 119 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 MTND4P28-201ENST00000426217 387 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 RPL23AP50-201ENST00000434149 455 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 AC098869.1-201ENST00000481627 292 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.47□□□□□ -2.33
LRRC42Q9Y546 RNU6-307P-201ENST00000516743 106 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 AC136443.5-201ENST00000603741 370 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 AC240442.1-201ENST00000616055 283 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 AC002553.4-201ENST00000616896 331 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 PISRT1.1-201ENST00000616930 107 ntBASIC0.47□□□□□ -2.33
LRRC42Q9Y546 AL442644.1-201ENST00000454390 3105 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 RNU6-926P-201ENST00000384075 107 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 MIR15B-201ENST00000385045 98 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 SNORD89-201ENST00000390981 114 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 SNORD99-201ENST00000408612 74 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 Y_RNA.592-201ENST00000410274 109 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 RNU2-54P-201ENST00000410299 190 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 AL390729.2-201ENST00000416137 156 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 U7.7-201ENST00000459276 60 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.46□□□□□ -2.34
LRRC42Q9Y546 AC069439.1-201ENST00000494739 167 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 RNU7-43P-201ENST00000516554 64 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 SNORD45.4-201ENST00000516629 73 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 SNORA18.7-201ENST00000516910 131 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 RNU6-1213P-201ENST00000517075 94 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 DEFB108E-201ENST00000524692 240 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 AC004812.1-201ENST00000540773 146 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.46□□□□□ -2.34
LRRC42Q9Y546 AC060780.3-201ENST00000589464 80 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 RNU6-94P-201ENST00000607728 107 ntBASIC0.46□□□□□ -2.34
LRRC42Q9Y546 MIR96-201ENST00000362288 78 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 RNU6-1199P-201ENST00000411249 104 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 MRPS18CP6-201ENST00000423587 223 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 RNU6-120P-201ENST00000516077 103 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 RNU6-966P-201ENST00000516479 104 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 AC022616.4-201ENST00000522985 181 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 AC036111.3-201ENST00000526389 112 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 AC006380.1-201ENST00000603598 186 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 7SK.10-201ENST00000621414 298 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.45□□□□□ -2.34
LRRC42Q9Y546 AL669831.3-213ENST00000636676 183 ntBASIC0.45□□□□□ -2.34
LRRC42Q9Y546 Y_RNA.72-201ENST00000362894 103 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 SNORA69.1-201ENST00000390904 137 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 MIR1302-7-201ENST00000408841 72 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 MLLT10P1-201ENST00000418346 262 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 FCF1P4-201ENST00000448326 183 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 CHEK2P4-201ENST00000450340 246 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 RPL30P15-201ENST00000457129 321 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 RNU6-1110P-201ENST00000516462 101 ntBASIC0.44□□□□□ -2.34
LRRC42Q9Y546 RNU6-1012P-201ENST00000516606 109 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms