Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC018448.1-201ENST00000552843 316 ntBASIC-0.07□□□□□ -2.42
HDGFL3Q9Y3E1 MIR4804-201ENST00000581683 73 ntBASIC-0.07□□□□□ -2.42
HDGFL3Q9Y3E1 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 SNORD45.3-201ENST00000363836 72 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 SNORD114-9-201ENST00000364370 72 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 RNU6-596P-201ENST00000365395 98 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 AL139396.1-201ENST00000421137 167 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 AC093534.1-201ENST00000504977 132 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 SNORA25.10-201ENST00000515926 124 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 RNA5SP94-201ENST00000516917 108 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 MIR548AO-201ENST00000579992 96 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 MIR3674-201ENST00000636576 68 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 ZNF299P-201ENST00000406845 1804 ntBASIC-0.08□□□□□ -2.42
HDGFL3Q9Y3E1 MIR411-201ENST00000362239 96 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 SNORD50B-201ENST00000364995 70 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 RNU7-56P-201ENST00000458744 62 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 RNU6-329P-201ENST00000459618 107 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 MIR7111-201ENST00000619751 72 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 Z69908.1-201ENST00000622603 247 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 MIR371B-201ENST00000638082 66 ntBASIC-0.09□□□□□ -2.42
HDGFL3Q9Y3E1 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 SNORD100-201ENST00000408573 76 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 RNU2-54P-201ENST00000410299 190 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 RNA5SP475-201ENST00000410568 110 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 AC022616.4-201ENST00000522985 181 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 ZNF519P2-201ENST00000557032 169 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 SNORA25.18-201ENST00000607153 114 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 uc_338.16-201ENST00000621804 95 ntBASIC-0.1□□□□□ -2.43
HDGFL3Q9Y3E1 RNA5SP214-201ENST00000363378 118 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 MLLT10P1-201ENST00000418346 262 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 RN7SKP298-201ENST00000515950 94 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 RNA5SP227-201ENST00000516184 113 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 RNA5SP480-201ENST00000516840 109 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 AC112693.2-201ENST00000556538 232 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 MIR4771-2-201ENST00000577758 74 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 MIR5190-201ENST00000581537 80 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 MIR4771-1-201ENST00000582617 74 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 MIR4676-201ENST00000583078 72 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 AC068137.3-201ENST00000639191 341 ntBASIC-0.11□□□□□ -2.43
HDGFL3Q9Y3E1 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 SNORA8.2-201ENST00000384372 139 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 MIR1197-201ENST00000408818 88 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 AC092447.3-201ENST00000426027 686 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 RNU7-66P-201ENST00000459469 62 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 AL158211.1-201ENST00000566763 763 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 MIR4273-201ENST00000582824 84 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 MIR4290-201ENST00000583807 95 ntBASIC-0.12□□□□□ -2.43
HDGFL3Q9Y3E1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 RNU6-131P-201ENST00000391144 107 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 AC015818.7-201ENST00000428754 109 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 AC087499.7-201ENST00000441958 109 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 RNU6-625P-201ENST00000459412 107 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 RNU6-256P-201ENST00000516747 97 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 RNA5SP330-201ENST00000517096 96 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 LRRC34P1-201ENST00000542742 915 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 MTND1P24-201ENST00000552175 861 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 MIR3672-201ENST00000584290 82 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 AC020891.4-201ENST00000605745 93 ntBASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.13□□□□□ -2.43
HDGFL3Q9Y3E1 SNORD115-30-201ENST00000364117 82 ntBASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 SNORA75.6-201ENST00000391318 127 ntBASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 SNRPGP10-201ENST00000432323 225 ntBASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 U8.19-201ENST00000459095 133 ntBASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 U8.22-201ENST00000459141 133 ntBASIC-0.14□□□□□ -2.43
HDGFL3Q9Y3E1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms