Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MTND1P27-201ENST00000451117 902 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 uc_338.4-201ENST00000616635 176 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 RNU6-509P-201ENST00000363519 107 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 RNU6-754P-201ENST00000391166 107 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 AC090844.1-201ENST00000422019 156 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 AC007283.2-201ENST00000424739 197 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 PSMA6P3-201ENST00000428242 164 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 SNRPGP1-201ENST00000553864 222 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 U6.114-201ENST00000636407 96 ntBASIC-1.25□□□□□ -2.61
CHD7Q9P2D1 RNU6-128P-201ENST00000383976 107 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 RNU6-417P-201ENST00000384712 107 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 MRPL42P3-201ENST00000401492 326 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 AC110760.3-202ENST00000515177 371 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 RNU6-765P-201ENST00000516916 99 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 AC087894.1-201ENST00000538359 518 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 RNU6-440P-201ENST00000390882 105 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 AL358934.1-201ENST00000432346 324 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 MTND1P11-201ENST00000456661 876 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 U8.19-201ENST00000459095 133 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 snoU13.2-201ENST00000459201 104 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 AL353572.1-201ENST00000442490 417 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 AC120024.3-201ENST00000603167 156 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.26□□□□□ -2.61
CHD7Q9P2D1 RNU6-843P-201ENST00000384454 104 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 SNRPGP10-201ENST00000432323 225 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 RNU7-14P-201ENST00000459331 62 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 AC091951.3-201ENST00000504093 246 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 AC023158.1-201ENST00000561632 1025 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 AC138649.3-201ENST00000622154 254 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 RNU6-973P-201ENST00000364690 107 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 SNORA49-201ENST00000386157 136 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 UQCRBP2-201ENST00000447827 297 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 RNU2-56P-201ENST00000516826 190 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 SNORA40.17-201ENST00000517256 115 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 MIR544B-201ENST00000582372 78 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 SNORD39.3-201ENST00000584451 71 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 AL008636.1-201ENST00000625038 1018 ntBASIC-1.27□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 AL078595.1-201ENST00000404458 226 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 MIR6874-201ENST00000635894 71 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 SNORD115-12-201ENST00000362583 82 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 SNORD115-9-201ENST00000362912 82 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 SNORD115-19-201ENST00000363098 82 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 SNORD115-18-201ENST00000363293 82 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 SNORD115-17-201ENST00000364612 82 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 RNY1P2-201ENST00000364820 117 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 SNORD115-20-201ENST00000365099 82 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 RNU6-142P-201ENST00000384019 107 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 MTND1P26-201ENST00000440488 538 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 AL355375.2-201ENST00000574825 175 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 MIR4473-201ENST00000583731 91 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 AC010608.3-201ENST00000625048 527 ntBASIC-1.28□□□□□ -2.61
CHD7Q9P2D1 RNU4-92P-201ENST00000363783 136 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 RNU1-141P-201ENST00000364623 158 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MIR1283-1-201ENST00000408494 87 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 AC103996.1-201ENST00000555468 102 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 Z94722.1-201ENST00000604328 474 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MIR6082-201ENST00000613604 109 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 AC133104.2-201ENST00000615272 193 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MIR20A-201ENST00000362279 71 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 SNORA1B-201ENST00000362535 133 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 RNU2-9P-201ENST00000410194 145 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 RNU6-927P-201ENST00000516199 100 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 AL356055.1-201ENST00000602528 446 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MIRLET7C-201ENST00000362160 84 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 SNORD115-13-201ENST00000363358 82 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 RNU6-873P-201ENST00000363833 107 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 SNORD74.6-201ENST00000364796 70 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MIR452-201ENST00000385020 85 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 SNORA75.4-201ENST00000391278 119 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MIR1253-201ENST00000408273 105 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MTCYBP39-201ENST00000437562 491 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 AC023538.1-201ENST00000534576 736 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms