Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.11□□□□□ -2.39
VAPAQ9P0L0 RNU6-977P-201ENST00000516411 103 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 MTND2P38-201ENST00000522536 667 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 MIR3612-201ENST00000579753 87 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 MIR548AR-201ENST00000582191 57 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 RNY1P16-201ENST00000363063 111 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.256-201ENST00000364594 104 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.364-201ENST00000365532 101 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
VAPAQ9P0L0 SNORD28B-201ENST00000390993 75 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 RNU6-679P-201ENST00000391003 106 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 RNU6-780P-201ENST00000391030 104 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 RNU6-332P-201ENST00000391193 108 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.1□□□□□ -2.39
VAPAQ9P0L0 USP9YP30-201ENST00000430729 455 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 HMGN2P32-201ENST00000444648 269 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 SNRPGP12-201ENST00000449481 213 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 SNORA25.10-201ENST00000515926 124 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 MIR3942-201ENST00000585264 109 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 MIR6515-201ENST00000619843 57 ntBASIC0.1□□□□□ -2.39
VAPAQ9P0L0 RNA5SP62-201ENST00000363457 110 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 SNORD50B-201ENST00000364995 70 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 RNU6-396P-201ENST00000365369 105 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 RNU4-45P-201ENST00000365469 141 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 RNU6-259P-201ENST00000383999 107 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.557-201ENST00000384680 107 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 UBE2V1P7-201ENST00000446395 340 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.09□□□□□ -2.4
VAPAQ9P0L0 snoU13.21-201ENST00000459368 105 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 RNU6-329P-201ENST00000459618 107 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.09□□□□□ -2.4
VAPAQ9P0L0 AC010486.3-201ENST00000511602 785 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 SNORA40.9-201ENST00000515895 93 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 SNORA25.12-201ENST00000516202 82 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 AL355375.2-201ENST00000574825 175 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.09□□□□□ -2.4
VAPAQ9P0L0 AC091925.1-201ENST00000623204 462 ntBASIC0.09□□□□□ -2.4
VAPAQ9P0L0 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.122-201ENST00000363331 96 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 RNU6-842P-201ENST00000384269 107 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 RNU6-1119P-201ENST00000384349 108 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 MIR570-201ENST00000384917 97 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 RNU6-131P-201ENST00000391144 107 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 RNU6-908P-201ENST00000410160 94 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 MTND2P9-201ENST00000422293 931 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 U8.22-201ENST00000459141 133 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.08□□□□□ -2.4
VAPAQ9P0L0 RNU1-54P-201ENST00000517181 120 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 AC022523.2-201ENST00000561045 150 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 NBR2-204ENST00000587322 63 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
VAPAQ9P0L0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.77-201ENST00000362962 107 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 RNU6-934P-201ENST00000365154 107 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.368-201ENST00000365547 113 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 RNU6-1310P-201ENST00000384153 107 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 MIR518E-201ENST00000385252 88 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 AC015818.7-201ENST00000428754 109 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.07□□□□□ -2.4
VAPAQ9P0L0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.07□□□□□ -2.4
VAPAQ9P0L0 AC087499.7-201ENST00000441958 109 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 AC022616.4-201ENST00000522985 181 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 MIR5701-3-201ENST00000578890 82 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 MIR3611-201ENST00000584484 83 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 MIR5701-1-201ENST00000585138 82 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 MIR5701-2-201ENST00000615634 82 ntBASIC0.07□□□□□ -2.4
VAPAQ9P0L0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.07□□□□□ -2.4
VAPAQ9P0L0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.07□□□□□ -2.4
VAPAQ9P0L0 SNORD114-23-201ENST00000363536 72 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 SNORD115-30-201ENST00000364117 82 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.370-201ENST00000365589 108 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 MIR518A1-201ENST00000385068 85 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 RNU6-700P-201ENST00000391043 107 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 RNU2-54P-201ENST00000410299 190 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.06□□□□□ -2.4
VAPAQ9P0L0 AC092989.1-201ENST00000481235 277 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.06□□□□□ -2.4
VAPAQ9P0L0 AC019235.1-201ENST00000503847 207 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.06□□□□□ -2.4
VAPAQ9P0L0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.06□□□□□ -2.4
VAPAQ9P0L0 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 RAC1P9-201ENST00000604990 392 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 RN7SKP299-201ENST00000606679 301 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 MIR6128-201ENST00000615528 109 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 AC078883.4-201ENST00000623218 367 ntBASIC0.06□□□□□ -2.4
VAPAQ9P0L0 RNU6-874P-201ENST00000362390 105 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 RNU6-451P-201ENST00000362921 107 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 RNA5SP517-201ENST00000364724 117 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.361-201ENST00000365515 120 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 SNORD71-201ENST00000411292 86 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 SNRPGP10-201ENST00000432323 225 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 MIR4771-2-201ENST00000577758 74 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 MIR548AO-201ENST00000579992 96 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 MIR4771-1-201ENST00000582617 74 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 RBM11P1-201ENST00000604951 799 ntBASIC0.05□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.38-201ENST00000362617 102 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 RNY3P3-201ENST00000363816 102 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 RNU6-318P-201ENST00000384283 103 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms