Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC136932.1-201ENST00000574771 208 ntBASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 AC124312.5-201ENST00000604451 268 ntBASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 MIR8070-201ENST00000616510 88 ntBASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 MIR7111-201ENST00000619751 72 ntBASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 AL121890.5-201ENST00000620848 304 ntBASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.7□□□□□ -2.14
SMC4Q9NTJ3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.424-201ENST00000384063 103 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 RNU6-505P-201ENST00000384427 107 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 MIR758-201ENST00000390227 88 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AC093852.1-201ENST00000503587 266 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AC091178.2-201ENST00000584401 117 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 SNORA28-201ENST00000606769 126 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AC040896.1-201ENST00000613819 479 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AL138825.1-201ENST00000618587 192 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AC127459.3-201ENST00000624328 466 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 AL161722.3-201ENST00000605789 2983 ntBASIC1.69□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.230-201ENST00000364348 109 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.286-201ENST00000364813 102 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 SNORA25.9-201ENST00000365087 128 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 SNORD116-13-201ENST00000384408 92 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 RNA5SP511-201ENST00000410487 115 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 U8.20-201ENST00000459445 131 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 RNU6-1337P-201ENST00000516525 95 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 RNU6-341P-201ENST00000516973 96 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 RNU6-988P-201ENST00000519081 107 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 AL160236.1-201ENST00000556317 195 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 MIR3937-201ENST00000580135 106 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 RAC1P9-201ENST00000604990 392 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.772-201ENST00000606692 102 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 MIR7974-201ENST00000615835 79 ntBASIC1.68□□□□□ -2.14
SMC4Q9NTJ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.105-201ENST00000363182 111 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 RNU6-324P-201ENST00000363957 106 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.439-201ENST00000384119 94 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.527-201ENST00000384573 102 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 AC006380.1-201ENST00000603598 186 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 AC073349.3-201ENST00000617616 186 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 AC022140.2-201ENST00000623500 188 ntBASIC1.67□□□□□ -2.14
SMC4Q9NTJ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 RNU4-50P-201ENST00000364361 141 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.389-201ENST00000383924 113 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 RNU2-61P-201ENST00000411069 191 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 SNX2P2-201ENST00000424553 323 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 Y_RNA.715-201ENST00000517082 110 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 MIR3145-201ENST00000580727 82 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 AC044792.1-201ENST00000593294 196 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 AL356055.1-201ENST00000602528 446 ntBASIC1.66□□□□□ -2.14
SMC4Q9NTJ3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
SMC4Q9NTJ3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.26-201ENST00000362539 101 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.551-201ENST00000384661 102 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 RNU6-376P-201ENST00000384731 106 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 MIR520G-201ENST00000385064 90 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 RNU5A-5P-201ENST00000411054 116 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 SNORA70.12-201ENST00000516084 153 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 RNU6-897P-201ENST00000517135 105 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 AL358944.1-201ENST00000528537 144 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 AP002004.2-201ENST00000531656 154 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 MIR3660-201ENST00000584845 100 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 DEFB117-201ENST00000602356 141 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 AL078604.3-201ENST00000615580 211 ntBASIC1.65□□□□□ -2.15
SMC4Q9NTJ3 AL391987.6-201ENST00000305671 199 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 RNU6-806P-201ENST00000365147 105 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 RNA5SP259-201ENST00000365541 109 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 MIR150-201ENST00000385048 84 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 MIR660-201ENST00000385235 97 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 SNORA40.6-201ENST00000391153 128 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 RNU6-121P-201ENST00000410525 99 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 HSPE1P13-201ENST00000451143 297 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 RNU7-110P-201ENST00000516891 62 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 MIR4680-201ENST00000580906 66 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 PRR13P7-201ENST00000605538 430 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 AC011373.1-201ENST00000607270 237 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 AL365434.2-201ENST00000607979 234 ntBASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMC4Q9NTJ3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms