Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 RNU6-648P-201ENST00000410190 107 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 RNU2-54P-201ENST00000410299 190 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 EIF1P2-201ENST00000428233 350 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 AL353997.1-201ENST00000432936 108 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 HMGN2P32-201ENST00000444648 269 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 UQCRBP2-201ENST00000447827 297 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 AC083798.1-201ENST00000472671 131 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 RNU6-835P-201ENST00000516974 104 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 AC008608.1-201ENST00000603910 127 ntBASIC-0.12□□□□□ -2.43
CISHQ9NSE2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.12□□□□□ -2.43
CISHQ9NSE2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.12□□□□□ -2.43
CISHQ9NSE2 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 SNORA36.1-201ENST00000363424 132 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 RNU6-716P-201ENST00000365621 103 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 SNORA69-201ENST00000383895 132 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 RNU6-125P-201ENST00000384505 107 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 RNU6-205P-201ENST00000390858 107 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 SEPT7P4-201ENST00000437076 306 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.13□□□□□ -2.43
CISHQ9NSE2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.13□□□□□ -2.43
CISHQ9NSE2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.13□□□□□ -2.43
CISHQ9NSE2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.13□□□□□ -2.43
CISHQ9NSE2 RNU7-175P-201ENST00000515915 61 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 AC018448.1-201ENST00000552843 316 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 AC090897.1-201ENST00000580909 226 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 uc_338.6-201ENST00000613544 171 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 MIR2909-201ENST00000617113 69 ntBASIC-0.13□□□□□ -2.43
CISHQ9NSE2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.13□□□□□ -2.43
CISHQ9NSE2 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 RNU6-595P-201ENST00000363944 107 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.14□□□□□ -2.43
CISHQ9NSE2 USP9YP16-201ENST00000430287 407 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 MTATP6P13-201ENST00000438531 667 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 USP9YP23-201ENST00000455085 407 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.14□□□□□ -2.43
CISHQ9NSE2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.14□□□□□ -2.43
CISHQ9NSE2 ACA59.1-201ENST00000515966 143 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 RNU6-89P-201ENST00000606519 100 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 MIR6755-201ENST00000619993 66 ntBASIC-0.14□□□□□ -2.43
CISHQ9NSE2 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.15□□□□□ -2.43
CISHQ9NSE2 MLLT10P1-201ENST00000418346 262 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.15□□□□□ -2.43
CISHQ9NSE2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC090617.3-201ENST00000573670 475 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 MIR3678-201ENST00000578455 94 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC027449.1-201ENST00000608890 407 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC092954.2-201ENST00000609103 430 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC090517.2-201ENST00000614966 680 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 AC097520.1-201ENST00000624435 385 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.15□□□□□ -2.43
CISHQ9NSE2 MTND1P7-201ENST00000632801 297 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 MIR3674-201ENST00000636576 68 ntBASIC-0.15□□□□□ -2.43
CISHQ9NSE2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.15□□□□□ -2.43
CISHQ9NSE2 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 SNORD115-30-201ENST00000364117 82 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 SNORA75-201ENST00000384158 137 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 PCNPP3-201ENST00000393579 471 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 RNU2-59P-201ENST00000410482 191 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 AC090844.1-201ENST00000422019 156 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 SNRPGP14-201ENST00000435400 219 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 RNU7-66P-201ENST00000459469 62 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 HMGN1P10-201ENST00000474557 553 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.16□□□□□ -2.44
CISHQ9NSE2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.16□□□□□ -2.44
CISHQ9NSE2 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 RNU6-830P-201ENST00000516353 107 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.16□□□□□ -2.44
CISHQ9NSE2 MIR4264-201ENST00000583520 66 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 AC010525.2-201ENST00000590920 195 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 AC019193.3-201ENST00000609144 554 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 AL050303.3-201ENST00000613704 284 ntBASIC-0.16□□□□□ -2.44
CISHQ9NSE2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
CISHQ9NSE2 ZNF299P-201ENST00000406845 1804 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 RNY1P16-201ENST00000363063 111 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 RNU6-596P-201ENST00000365395 98 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 RNU6-700P-201ENST00000391043 107 ntBASIC-0.17□□□□□ -2.44
CISHQ9NSE2 MIR938-201ENST00000401216 83 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 325.5 ms