Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 RNU6-235P-201ENST00000362644 107 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 Y_RNA.251-201ENST00000364551 99 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 RNU6-1082P-201ENST00000364574 107 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 RNU6-144P-201ENST00000383951 107 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 Y_RNA.563-201ENST00000384707 108 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 SNORA36B-201ENST00000410438 131 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 EDDM3CP-201ENST00000415977 425 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 HMGN2P9-201ENST00000476875 229 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 SRIP1-201ENST00000489235 288 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 RNU7-115P-201ENST00000516433 55 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.21□□□□□ -1.9
CWC22Q9HCG8 MIR5688-201ENST00000580619 83 ntBASIC3.21□□□□□ -1.9
CWC22Q9HCG8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CWC22Q9HCG8 RNU6-1298P-201ENST00000362456 101 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 SNORD45.3-201ENST00000363836 72 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 RNU6-476P-201ENST00000384726 107 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 MIR518C-201ENST00000384822 101 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 MIR586-201ENST00000385035 97 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 RNU2-32P-201ENST00000411193 191 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 HSPE1P13-201ENST00000451143 297 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 AC096725.1-201ENST00000514266 313 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 RNA5SP82-201ENST00000516707 92 ntBASIC3.2□□□□□ -1.9
CWC22Q9HCG8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.2□□□□□ -1.9
CWC22Q9HCG8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CWC22Q9HCG8 SNORA25.6-201ENST00000364121 118 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 RNU6-546P-201ENST00000383991 107 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 MIR9-1-201ENST00000385198 89 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 SNORA75.5-201ENST00000391291 81 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 AL355796.1-201ENST00000406706 323 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 SNORD23.1-201ENST00000408212 104 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.19□□□□□ -1.9
CWC22Q9HCG8 AL513328.1-201ENST00000446460 224 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 AC245102.2-201ENST00000448956 180 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 RNU6-1337P-201ENST00000516525 95 ntBASIC3.19□□□□□ -1.9
CWC22Q9HCG8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.19□□□□□ -1.9
CWC22Q9HCG8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CWC22Q9HCG8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CWC22Q9HCG8 RNU1-112P-201ENST00000364401 164 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 SNORA6-201ENST00000384033 151 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 MIR1283-1-201ENST00000408494 87 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 AL121890.1-201ENST00000435457 205 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 HMGN2P18-201ENST00000450680 270 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 AC018868.1-201ENST00000491307 315 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 CYCTP-201ENST00000504253 315 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.18□□□□□ -1.9
CWC22Q9HCG8 AC090049.2-201ENST00000550377 109 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 PRELID2P1-201ENST00000552837 301 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 AC127455.1-201ENST00000565496 145 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 MTND5P34-201ENST00000568888 325 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 MIR4529-201ENST00000578110 78 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 AC120024.3-201ENST00000603167 156 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 MIR6817-201ENST00000615588 66 ntBASIC3.18□□□□□ -1.9
CWC22Q9HCG8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CWC22Q9HCG8 RNU6-1144P-201ENST00000384247 104 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 SNORD14D-201ENST00000384390 87 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 MIR1185-2-201ENST00000408687 86 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 RNU4-43P-201ENST00000410628 137 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 RNA5SP21-201ENST00000410917 96 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 RPL23AP7-203ENST00000449021 469 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 SNRPGP8-201ENST00000454064 226 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 RN7SKP179-201ENST00000516126 217 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.17□□□□□ -1.9
CWC22Q9HCG8 CENPCP1-201ENST00000533085 2578 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CWC22Q9HCG8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CWC22Q9HCG8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CWC22Q9HCG8 SNORD31B-201ENST00000364977 69 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 SNORA20B-201ENST00000384220 132 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 Y_RNA.587-201ENST00000391210 103 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.16□□□□□ -1.9
CWC22Q9HCG8 AL158823.1-201ENST00000418441 478 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 AC016717.1-201ENST00000448918 286 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 Y_RNA.709-201ENST00000516952 92 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 AC090142.3-201ENST00000519012 385 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 AC027419.1-201ENST00000522976 328 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.16□□□□□ -1.9
CWC22Q9HCG8 MTND5P32-201ENST00000560711 1802 ntBASIC3.16□□□□□ -1.9
CWC22Q9HCG8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CWC22Q9HCG8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CWC22Q9HCG8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CWC22Q9HCG8 MIR6073-201ENST00000352083 89 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 RNA5SP68-201ENST00000363885 119 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 RNU6-743P-201ENST00000364151 106 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 SNORA25.7-201ENST00000364375 127 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 MIR29C-201ENST00000385231 88 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 MIR873-201ENST00000401120 77 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 MIR1278-201ENST00000408753 81 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 RNU7-57P-201ENST00000459540 60 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 RNU6-63P-201ENST00000516690 95 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 RNU7-193P-201ENST00000516723 65 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 Y_RNA.712-201ENST00000517011 92 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 POLR3GP1-201ENST00000594073 261 ntBASIC3.15□□□□□ -1.91
CWC22Q9HCG8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CWC22Q9HCG8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CWC22Q9HCG8 Z82195.2-201ENST00000612348 18351 ntBASIC3.14□□□□□ -1.91
CWC22Q9HCG8 AL356292.1-201ENST00000283110 373 ntBASIC3.14□□□□□ -1.91
CWC22Q9HCG8 DEFA7P-201ENST00000382676 285 ntBASIC3.14□□□□□ -1.91
CWC22Q9HCG8 SNORA22-201ENST00000383907 134 ntBASIC3.14□□□□□ -1.91
CWC22Q9HCG8 Y_RNA.584-201ENST00000391090 114 ntBASIC3.14□□□□□ -1.91
CWC22Q9HCG8 MIR300-201ENST00000401138 83 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms