Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.61□□□□□ -2.31
LIN28AQ9H9Z2 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
LIN28AQ9H9Z2 RNU6-63P-201ENST00000516690 95 ntBASIC0.61□□□□□ -2.31
LIN28AQ9H9Z2 Y_RNA.708-201ENST00000516950 96 ntBASIC0.61□□□□□ -2.31
LIN28AQ9H9Z2 U4.5-201ENST00000617137 123 ntBASIC0.61□□□□□ -2.31
LIN28AQ9H9Z2 MIR6515-201ENST00000619843 57 ntBASIC0.61□□□□□ -2.31
LIN28AQ9H9Z2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
LIN28AQ9H9Z2 Y_RNA.358-201ENST00000365491 99 ntBASIC0.6□□□□□ -2.31
LIN28AQ9H9Z2 MIR489-201ENST00000384923 84 ntBASIC0.6□□□□□ -2.31
LIN28AQ9H9Z2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.6□□□□□ -2.31
LIN28AQ9H9Z2 RNU6-1050P-201ENST00000410388 107 ntBASIC0.6□□□□□ -2.31
LIN28AQ9H9Z2 snoU13.18-201ENST00000459483 104 ntBASIC0.6□□□□□ -2.31
LIN28AQ9H9Z2 AC023827.1-201ENST00000569247 97 ntBASIC0.6□□□□□ -2.31
LIN28AQ9H9Z2 MIR4764-201ENST00000580680 88 ntBASIC0.6□□□□□ -2.31
LIN28AQ9H9Z2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 RNU6-1084P-201ENST00000362498 107 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 RNU4-24P-201ENST00000364565 139 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 Y_RNA.295-201ENST00000364918 102 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 MIR1185-1-201ENST00000408598 86 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 SNORD99-201ENST00000408612 74 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 Y_RNA.594-201ENST00000410373 140 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 SNORD12B-201ENST00000410433 91 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 Z83846.1-201ENST00000446798 265 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 Y_RNA.682-201ENST00000516457 100 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 RNU6-1337P-201ENST00000516525 95 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 AC023442.1-201ENST00000531247 422 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
LIN28AQ9H9Z2 SNORD115-30-201ENST00000364117 82 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-318P-201ENST00000384283 103 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-1148P-201ENST00000410992 104 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 RNU4-49P-201ENST00000516080 140 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 RNU2-12P-201ENST00000517216 168 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 MIR7111-201ENST00000619751 72 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 7SK.10-201ENST00000621414 298 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 AC023934.1-201ENST00000574529 2389 ntBASIC0.58□□□□□ -2.32
LIN28AQ9H9Z2 Y_RNA.41-201ENST00000362646 102 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 RNY1-201ENST00000364228 113 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 snoU2-30.1-201ENST00000365012 70 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 Y_RNA.370-201ENST00000365589 108 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-994P-201ENST00000410507 111 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 AC092423.1-201ENST00000430165 186 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 MTND1P4-201ENST00000435196 415 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-329P-201ENST00000459618 107 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-874P-201ENST00000362390 105 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 Y_RNA.796-201ENST00000364268 102 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 Y_RNA.799-201ENST00000364992 102 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 MIR516B2-201ENST00000385190 85 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 AC098934.3-201ENST00000430450 190 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 RPL17P19-201ENST00000489069 552 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 RNU7-41P-201ENST00000515917 61 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 SNORD45.4-201ENST00000516629 73 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 SNORA18.7-201ENST00000516910 131 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 AC004467.1-201ENST00000615678 330 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 PISRT1.1-201ENST00000616930 107 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 AC007742.2-201ENST00000618226 398 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 AC092794.2-201ENST00000620933 563 ntBASIC0.56□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-1301P-201ENST00000362724 104 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 SNORD113.3-201ENST00000364630 78 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 RNU1-133P-201ENST00000364867 167 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 Y_RNA.453-201ENST00000384223 109 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 Y_RNA.482-201ENST00000384377 111 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 MIR522-201ENST00000385071 87 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 RNU1-119P-201ENST00000391122 165 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 MIR548K-201ENST00000408406 116 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 RN7SKP164-201ENST00000516138 266 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 Y_RNA.670-201ENST00000516255 105 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 AC036111.3-201ENST00000526389 112 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 AC009229.3-201ENST00000608056 282 ntBASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.55□□□□□ -2.32
LIN28AQ9H9Z2 SNORA25.3-201ENST00000363205 127 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-1297P-201ENST00000384415 104 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-131P-201ENST00000391144 107 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 AL353997.1-201ENST00000432936 108 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 AC107399.1-201ENST00000451226 265 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 RPS29P25-201ENST00000481709 171 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-408P-201ENST00000515910 100 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 AC093027.1-201ENST00000546698 429 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 AC018638.8-201ENST00000588755 281 ntBASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.53□□□□□ -2.32
LIN28AQ9H9Z2 RNU6-601P-201ENST00000384540 107 ntBASIC0.53□□□□□ -2.32
LIN28AQ9H9Z2 RPS3AP52-201ENST00000435639 297 ntBASIC0.53□□□□□ -2.32
LIN28AQ9H9Z2 SNORD123-201ENST00000459473 70 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms