Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC007014.2-201ENST00000615581 479 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 AC002553.4-201ENST00000616896 331 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 MIR330-201ENST00000362196 94 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 RNA5SP347-201ENST00000362445 119 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 SNORD114-7-201ENST00000362520 77 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 RNA5SP499-201ENST00000363982 119 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 RNU6-1310P-201ENST00000384153 107 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 MIR526A1-201ENST00000384897 85 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 MTND3P8-201ENST00000412909 339 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AF235103.2-201ENST00000525753 346 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AP003484.1-201ENST00000530974 250 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AC068790.6-201ENST00000602558 258 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AC004832.4-201ENST00000608952 331 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 AC073869.6-201ENST00000640656 341 ntBASIC0.79□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.339-201ENST00000365325 102 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.404-201ENST00000383978 102 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.482-201ENST00000384377 111 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 RNU6-601P-201ENST00000384540 107 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 RNA5SP511-201ENST00000410487 115 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 AC107399.1-201ENST00000451226 265 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 RNU7-21P-201ENST00000459430 62 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 AC005899.2-201ENST00000584353 90 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 AC092794.2-201ENST00000620933 563 ntBASIC0.78□□□□□ -2.28
RPAP1Q9BWH6 RNU6-163P-201ENST00000384396 106 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 MIR1277-201ENST00000408536 78 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 AC092628.1-201ENST00000436250 252 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 MTND3P10-201ENST00000450967 341 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 snoU13.25-201ENST00000458945 104 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 AC084782.3-201ENST00000612282 578 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 MIR8087-201ENST00000612745 78 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 PISRT1.1-201ENST00000616930 107 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 AL109933.3-201ENST00000619095 188 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 AC027279.3-201ENST00000625055 122 ntBASIC0.77□□□□□ -2.29
RPAP1Q9BWH6 RNU6-1301P-201ENST00000362724 104 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 SNORD12B-201ENST00000410433 91 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 AL354751.2-201ENST00000415471 210 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 PIGPP3-201ENST00000425307 415 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 MTND1P4-201ENST00000435196 415 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 AC245047.8-201ENST00000456455 284 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 RPL17P19-201ENST00000489069 552 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 AC090142.3-201ENST00000519012 385 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 MIR3192-201ENST00000584920 77 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 MIR1244-1-201ENST00000612829 85 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 AC091925.1-201ENST00000623204 462 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 MIR1244-3-201ENST00000635744 85 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 MIR1244-2-201ENST00000636449 85 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 MIR1244-4-202ENST00000636813 85 ntBASIC0.76□□□□□ -2.29
RPAP1Q9BWH6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.6-201ENST00000362350 114 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.85-201ENST00000363014 111 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 SNORD68-201ENST00000363214 84 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.178-201ENST00000363832 102 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 SNORA75.2-201ENST00000391138 150 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 SNORA75.3-201ENST00000391231 150 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 RPL23AP50-201ENST00000434149 455 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 ELOCP24-201ENST00000456370 334 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 CYCTP-201ENST00000504253 315 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 RNU6-408P-201ENST00000515910 100 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 RNU6-496P-201ENST00000516145 99 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 RNU6-197P-201ENST00000516680 100 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 MIR2355-201ENST00000517199 87 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 AC120024.3-201ENST00000603167 156 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 AL391903.3-201ENST00000612158 163 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 AC004467.1-201ENST00000615678 330 ntBASIC0.75□□□□□ -2.29
RPAP1Q9BWH6 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 RNA5SP257-201ENST00000363023 116 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.88-201ENST00000363029 99 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.336-201ENST00000365307 109 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 SNORD116-13-201ENST00000384408 92 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 SNORA75.4-201ENST00000391278 119 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 AL162725.1-201ENST00000435405 301 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 MIR2053-201ENST00000459295 91 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 AC116353.2-201ENST00000505332 712 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 AC114811.1-201ENST00000507207 168 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 SNORD111.1-201ENST00000516421 86 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms