Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RN7SKP164-201ENST00000516138 266 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.38□□□□□ -2.03
PNKPQ96T60 AC127455.1-201ENST00000565496 145 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 MIR4724-201ENST00000579485 89 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 MIR5002-201ENST00000584713 97 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 AL449363.1-201ENST00000617815 186 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
PNKPQ96T60 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
PNKPQ96T60 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
PNKPQ96T60 MIR367-201ENST00000362299 68 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 snoU2-30.2-201ENST00000362805 70 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 Y_RNA.75-201ENST00000362927 97 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 Y_RNA.170-201ENST00000363746 110 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 RNU6-376P-201ENST00000384731 106 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 RNA5SP467-201ENST00000391274 118 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 RNU6-394P-201ENST00000410735 107 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 RNU4-61P-201ENST00000411243 107 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 EBAG9P1-201ENST00000418955 543 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 AC010154.1-201ENST00000425857 269 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.37□□□□□ -2.03
PNKPQ96T60 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 RNU6-1007P-201ENST00000516586 107 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 RNU7-116P-201ENST00000516940 62 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 MTND5P41-201ENST00000517498 206 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 MIR3133-201ENST00000583157 78 ntBASIC2.37□□□□□ -2.03
PNKPQ96T60 SNORD115-3-201ENST00000363100 82 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 Y_RNA.229-201ENST00000364347 113 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 RNA5SP138-201ENST00000365098 114 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 RNU6-746P-201ENST00000384112 109 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 RNU6-187P-201ENST00000384139 106 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 Y_RNA.506-201ENST00000384494 102 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 RNU6-160P-201ENST00000384591 107 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 EDDM3CP-201ENST00000415977 425 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 SEPT7P4-201ENST00000437076 306 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.36□□□□□ -2.03
PNKPQ96T60 RNU6-1146P-201ENST00000516282 102 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.36□□□□□ -2.03
PNKPQ96T60 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PNKPQ96T60 MIR3144-201ENST00000579460 79 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 MIR4744-201ENST00000581563 82 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 AC108706.1-201ENST00000611053 297 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 MIR338-201ENST00000636369 67 ntBASIC2.36□□□□□ -2.03
PNKPQ96T60 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PNKPQ96T60 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PNKPQ96T60 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PNKPQ96T60 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
PNKPQ96T60 SNORA33-201ENST00000363664 130 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 RNU1-96P-201ENST00000364163 162 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 RNU6-312P-201ENST00000364629 107 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 RNU6-275P-201ENST00000364910 107 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 Y_RNA.398-201ENST00000383952 99 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 Y_RNA.441-201ENST00000384123 112 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 RNU6-125P-201ENST00000384505 107 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 RNU6-578P-201ENST00000390980 103 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 MIR1278-201ENST00000408753 81 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 AL353689.1-201ENST00000438895 199 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.35□□□□□ -2.03
PNKPQ96T60 RPS4XP11-201ENST00000446897 772 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 RNU6-437P-201ENST00000459408 95 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 RPPH1-2P-201ENST00000516688 293 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 CYCSP26-201ENST00000534107 320 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 AL929325.1-201ENST00000603096 117 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 AC073413.2-201ENST00000604332 360 ntBASIC2.35□□□□□ -2.03
PNKPQ96T60 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.35□□□□□ -2.03
PNKPQ96T60 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PNKPQ96T60 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PNKPQ96T60 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
PNKPQ96T60 RNU6-103P-201ENST00000363686 107 ntBASIC2.34□□□□□ -2.03
PNKPQ96T60 RNU6-1164P-201ENST00000364428 107 ntBASIC2.34□□□□□ -2.03
PNKPQ96T60 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
PNKPQ96T60 MIR616-201ENST00000385293 97 ntBASIC2.34□□□□□ -2.03
PNKPQ96T60 RNU1-131P-201ENST00000458943 161 ntBASIC2.34□□□□□ -2.03
PNKPQ96T60 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.34□□□□□ -2.03
PNKPQ96T60 RNU7-128P-201ENST00000517247 62 ntBASIC2.34□□□□□ -2.03
PNKPQ96T60 MIR5688-201ENST00000580619 83 ntBASIC2.34□□□□□ -2.03
PNKPQ96T60 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.34□□□□□ -2.03
PNKPQ96T60 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PNKPQ96T60 Y_RNA.23-201ENST00000362496 106 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 RNA5SP493-201ENST00000364115 91 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 Y_RNA.272-201ENST00000364696 102 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 RNA5SP160-201ENST00000364866 120 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 SNORA72-201ENST00000384339 132 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 AL117342.1-201ENST00000404861 406 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 ATP5J2P3-201ENST00000451550 258 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 AL021397.1-201ENST00000451806 248 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 RNU6-346P-201ENST00000516288 111 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 AC109810.1-201ENST00000534066 224 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 AC007229.1-201ENST00000590455 412 ntBASIC2.33□□□□□ -2.04
PNKPQ96T60 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.33□□□□□ -2.04
PNKPQ96T60 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PNKPQ96T60 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
PNKPQ96T60 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PNKPQ96T60 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PNKPQ96T60 RNU6-1130P-201ENST00000365434 107 ntBASIC2.32□□□□□ -2.04
PNKPQ96T60 AL606845.1-201ENST00000404881 255 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 253.6 ms