Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC011373.1-201ENST00000607270 237 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 MIRLET7C-201ENST00000362160 84 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 RNU6-457P-201ENST00000363999 107 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 Y_RNA.813-201ENST00000364639 102 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 RNU6-855P-201ENST00000410395 104 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 RNU6-710P-201ENST00000410424 105 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 MTND4P19-201ENST00000446659 478 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 RNA5SP458-201ENST00000516188 119 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 SNORD53B-201ENST00000577887 78 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 AL513534.2-201ENST00000603836 250 ntBASIC1.16□□□□□ -2.22
RAB40CQ96S21 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
RAB40CQ96S21 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
RAB40CQ96S21 U8.1-201ENST00000362843 134 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 SNORD68-201ENST00000363214 84 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 Y_RNA.143-201ENST00000363520 106 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 Y_RNA.424-201ENST00000384063 103 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 RNU6-937P-201ENST00000384325 106 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 Y_RNA.551-201ENST00000384661 102 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 RNU6-21P-201ENST00000384710 107 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 MIR764-201ENST00000390811 85 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 SNORA67.5-201ENST00000391036 107 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.15□□□□□ -2.23
RAB40CQ96S21 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.15□□□□□ -2.23
RAB40CQ96S21 RPS20P10-201ENST00000451209 253 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 RNA5SP61-201ENST00000516453 100 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 AC022616.4-201ENST00000522985 181 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 AC008269.2-201ENST00000561915 1105 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 AC005972.2-201ENST00000604690 348 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 AL160413.1-201ENST00000622780 310 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 AC090574.1-201ENST00000623186 233 ntBASIC1.15□□□□□ -2.23
RAB40CQ96S21 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RAB40CQ96S21 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 Y_RNA.31-201ENST00000362574 102 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 Y_RNA.460-201ENST00000384255 102 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 SNORD63-201ENST00000384262 68 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 RNU6-1105P-201ENST00000384774 107 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 RNU4-30P-201ENST00000410245 143 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 SNRPGP13-201ENST00000442212 177 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 DYNLT3P2-201ENST00000442517 295 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 SNORD13-201ENST00000459299 104 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 CYCTP-201ENST00000504253 315 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 SNORA25.10-201ENST00000515926 124 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 RNU6-322P-201ENST00000516010 103 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 SNORA31.24-201ENST00000517232 57 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 RNU6-1116P-201ENST00000517269 99 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 DEFB117-201ENST00000602356 141 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 AC120024.3-201ENST00000603167 156 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 PART1_1.1-201ENST00000611761 217 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 AL591926.4-201ENST00000616895 298 ntBASIC1.14□□□□□ -2.23
RAB40CQ96S21 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
RAB40CQ96S21 RNA5SP432-201ENST00000362480 116 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 RNU6-163P-201ENST00000384396 106 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 MIR653-201ENST00000385279 96 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 SNORA67.6-201ENST00000391093 99 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 AL451046.2-201ENST00000403074 277 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 MIR1323-201ENST00000408090 73 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 RNU6-130P-201ENST00000411112 103 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 AC024067.1-201ENST00000426199 223 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 AL354695.1-201ENST00000427935 228 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 RNU6-917P-201ENST00000516294 104 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 GHRLOS.1-201ENST00000610995 70 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 AC068647.2-201ENST00000637380 353 ntBASIC1.13□□□□□ -2.23
RAB40CQ96S21 Y_RNA.61-201ENST00000362835 102 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 RNU1-17P-201ENST00000363022 152 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 SNORD81.1-201ENST00000363064 77 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 Y_RNA.140-201ENST00000363474 103 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 RNA5SP99-201ENST00000364020 114 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 RNU6-60P-201ENST00000364792 103 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 Y_RNA.341-201ENST00000365341 102 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 SNORA2.2-201ENST00000365473 135 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 SNORA72-201ENST00000384339 132 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 SNORD41-201ENST00000386967 70 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 MIR891A-201ENST00000401237 79 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 AL590004.1-201ENST00000405321 300 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 PMCHL1-202ENST00000423102 261 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 PIGPP3-201ENST00000425307 415 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 AC015922.2-201ENST00000435593 184 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 AC104332.1-201ENST00000440471 797 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 AC124312.5-201ENST00000604451 268 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.12□□□□□ -2.23
RAB40CQ96S21 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.12□□□□□ -2.23
RAB40CQ96S21 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.12□□□□□ -2.23
RAB40CQ96S21 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RAB40CQ96S21 RNU6-833P-201ENST00000363486 107 ntBASIC1.11□□□□□ -2.23
RAB40CQ96S21 Y_RNA.148-201ENST00000363557 117 ntBASIC1.11□□□□□ -2.23
RAB40CQ96S21 Y_RNA.253-201ENST00000364562 112 ntBASIC1.11□□□□□ -2.23
RAB40CQ96S21 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
RAB40CQ96S21 Y_RNA.456-201ENST00000384232 111 ntBASIC1.11□□□□□ -2.23
RAB40CQ96S21 Y_RNA.535-201ENST00000384612 99 ntBASIC1.11□□□□□ -2.23
RAB40CQ96S21 MIR3145-201ENST00000580727 82 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms