Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU6-1148P-201ENST00000410992 104 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 AC009161.1-201ENST00000417306 376 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.6□□□□□ -2.31
USP47Q96K76 MTND1P17-201ENST00000448961 204 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 AC114811.1-201ENST00000507207 168 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 AC022868.1-201ENST00000517767 391 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 MIR5701-3-201ENST00000578890 82 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 MIR5701-1-201ENST00000585138 82 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 MIR5701-2-201ENST00000615634 82 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 AC027279.3-201ENST00000625055 122 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 MIR3674-201ENST00000636576 68 ntBASIC0.6□□□□□ -2.31
USP47Q96K76 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
USP47Q96K76 Y_RNA.194-201ENST00000363985 102 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 Y_RNA.280-201ENST00000364765 112 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 Y_RNA.301-201ENST00000364990 103 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 RNU6-1335P-201ENST00000365426 107 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 Y_RNA.473-201ENST00000384333 102 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.59□□□□□ -2.31
USP47Q96K76 DLGAP5P1-201ENST00000430307 464 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 AL162725.1-201ENST00000435405 301 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 UBE2V1P7-201ENST00000446395 340 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 U8.22-201ENST00000459141 133 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 RNU6-625P-201ENST00000459412 107 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 CYCTP-201ENST00000504253 315 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 SNORA70.12-201ENST00000516084 153 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 AC023827.1-201ENST00000569247 97 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 AC093913.1-201ENST00000614178 329 ntBASIC0.59□□□□□ -2.31
USP47Q96K76 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.59□□□□□ -2.31
USP47Q96K76 MIR410-201ENST00000362222 80 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 RNY1P16-201ENST00000363063 111 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 SNORA50A-201ENST00000384225 134 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
USP47Q96K76 MIR1298-201ENST00000408783 112 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 Y_RNA.621-201ENST00000411065 96 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 MTND3P21-201ENST00000433774 331 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.58□□□□□ -2.32
USP47Q96K76 MTND2P38-201ENST00000522536 667 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 AC024909.2-201ENST00000553035 286 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 AC005828.6-201ENST00000606610 232 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 AC005014.2-201ENST00000607795 599 ntBASIC0.58□□□□□ -2.32
USP47Q96K76 Y_RNA.2-201ENST00000362330 96 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 RNU6-874P-201ENST00000362390 105 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 SNORA25.3-201ENST00000363205 127 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 RNY4P14-201ENST00000363656 96 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 Y_RNA.358-201ENST00000365491 99 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 COX6CP6-201ENST00000490840 228 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AC113410.1-201ENST00000505029 247 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.57□□□□□ -2.32
USP47Q96K76 MIR4790-201ENST00000577799 79 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 MIR4514-201ENST00000581410 57 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AC131055.1-201ENST00000584626 316 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AC007014.2-201ENST00000615581 479 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 MIR103A2-201ENST00000362154 78 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 Y_RNA.9-201ENST00000362354 101 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 RNU4-75P-201ENST00000364621 146 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 Y_RNA.554-201ENST00000384672 102 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 MIR452-201ENST00000385020 85 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 MIR181A1-201ENST00000385026 110 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AL354751.2-201ENST00000415471 210 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AC093019.1-201ENST00000443135 252 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 ELOCP24-201ENST00000456370 334 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 U7.7-201ENST00000459276 60 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.57□□□□□ -2.32
USP47Q96K76 Y_RNA.682-201ENST00000516457 100 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AC023442.1-201ENST00000531247 422 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.57□□□□□ -2.32
USP47Q96K76 AC109810.1-201ENST00000534066 224 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 SEPT14P17-201ENST00000617978 177 ntBASIC0.57□□□□□ -2.32
USP47Q96K76 Y_RNA.243-201ENST00000364481 109 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 Y_RNA.412-201ENST00000384001 104 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 RNU6-318P-201ENST00000384283 103 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 MIR520C-201ENST00000385005 87 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 MIR516B2-201ENST00000385190 85 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.56□□□□□ -2.32
USP47Q96K76 AL139396.1-201ENST00000421137 167 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 MTCYBP10-201ENST00000424905 650 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 RPL23AP50-201ENST00000434149 455 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 AC026782.1-201ENST00000512952 449 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 SNORA40.9-201ENST00000515895 93 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 RNU4-57P-201ENST00000515980 135 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 SNORA62.5-201ENST00000516634 120 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 AC018462.2-201ENST00000605375 395 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 AC015540.1-201ENST00000615828 501 ntBASIC0.56□□□□□ -2.32
USP47Q96K76 Y_RNA.89-201ENST00000363031 102 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.55□□□□□ -2.32
USP47Q96K76 SUMO1P2-201ENST00000452524 304 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 RNU7-41P-201ENST00000515917 61 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 RNU4-49P-201ENST00000516080 140 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 SNORA74.3-201ENST00000517108 154 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 AC105029.1-201ENST00000520250 669 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 AP003716.2-201ENST00000528260 108 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 AC025627.3-201ENST00000582078 182 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 AL591926.4-201ENST00000616895 298 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
USP47Q96K76 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.55□□□□□ -2.32
USP47Q96K76 SNORD114-7-201ENST00000362520 77 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms