Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 snoU13.26-201ENST00000459452 105 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 RNA5SP20-201ENST00000515976 84 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 RNU6-570P-201ENST00000517051 105 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 RNU7-128P-201ENST00000517247 62 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 AC023157.2-201ENST00000540596 141 ntBASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.52□□□□□ -2.17
PDLIM5Q96HC4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 AL161722.3-201ENST00000605789 2983 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 RNU6-324P-201ENST00000363957 106 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 RNU6-463P-201ENST00000384340 107 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.569-201ENST00000384749 103 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 MIR517C-201ENST00000385103 95 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 MIR1289-2-201ENST00000408360 111 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 MRPS10P1-201ENST00000448483 130 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 RPS26P45-201ENST00000471748 340 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 TRBVB-201ENST00000477100 408 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 AL137100.2-201ENST00000555786 315 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 MIR3937-201ENST00000580135 106 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 MIR3145-201ENST00000580727 82 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 DEFB117-201ENST00000602356 141 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.51□□□□□ -2.17
PDLIM5Q96HC4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU1-22P-201ENST00000363334 158 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU6-290P-201ENST00000365212 101 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU6-407P-201ENST00000365280 104 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU6-117P-201ENST00000365415 107 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU6-505P-201ENST00000384427 107 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU6-713P-201ENST00000384761 107 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 MIR1302-6-201ENST00000408466 90 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 POLR2KP2-201ENST00000438155 177 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU6-1338P-201ENST00000516328 91 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 RNU1-142P-201ENST00000516682 145 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 MIR4438-201ENST00000585271 93 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
PDLIM5Q96HC4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.144-201ENST00000363521 113 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.193-201ENST00000363979 102 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.237-201ENST00000364439 102 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RNU6-326P-201ENST00000365480 107 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.461-201ENST00000384263 103 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RNU6-196P-201ENST00000384315 107 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 MTCO1P5-201ENST00000433573 344 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 AL135790.2-201ENST00000437701 267 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 HSPE1P13-201ENST00000451143 297 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RNU7-34P-201ENST00000459394 64 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RPS27P22-201ENST00000478056 241 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.668-201ENST00000516233 93 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RNU7-99P-201ENST00000516271 62 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RNU6-191P-201ENST00000516295 94 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 DEFB108E-201ENST00000524692 240 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 U4.1-201ENST00000620349 87 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 7SK.10-201ENST00000621414 298 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.49□□□□□ -2.17
PDLIM5Q96HC4 MIR335-201ENST00000362173 94 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 RNU4-80P-201ENST00000363200 141 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.310-201ENST00000365063 113 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.452-201ENST00000384202 108 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.556-201ENST00000384677 113 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 SNORA11.2-201ENST00000408318 127 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AL161935.2-201ENST00000414627 60 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 SNORD127-201ENST00000458892 86 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AL163195.1-201ENST00000496941 348 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AC097462.1-201ENST00000514125 324 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 SERF1AP1-201ENST00000514575 187 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 SNORA70.12-201ENST00000516084 153 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 RNU2-31P-201ENST00000516954 155 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 RPL21P9-201ENST00000556149 474 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AL359075.3-201ENST00000613288 217 ntBASIC1.48□□□□□ -2.17
PDLIM5Q96HC4 AL391987.6-201ENST00000305671 199 ntBASIC1.47□□□□□ -2.17
PDLIM5Q96HC4 RNU6-801P-201ENST00000364087 105 ntBASIC1.47□□□□□ -2.17
PDLIM5Q96HC4 RNA5SP190-201ENST00000365222 118 ntBASIC1.47□□□□□ -2.17
PDLIM5Q96HC4 Y_RNA.368-201ENST00000365547 113 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms