Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL606534.2-204ENST00000635008 178 ntBASIC1.19□□□□□ -2.22
VPS33AQ96AX1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RNU1-17P-201ENST00000363022 152 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.526-201ENST00000384572 110 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 MIR1261-201ENST00000408659 82 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 AL160004.2-201ENST00000432935 350 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RPS20P10-201ENST00000451209 253 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RN7SL429P-201ENST00000479090 223 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RN7SL489P-201ENST00000486185 223 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RN7SL327P-201ENST00000488659 223 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RNU4-77P-201ENST00000516692 156 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RNU1-92P-201ENST00000517017 135 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 MIR5188-201ENST00000583467 113 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RPS29P30-201ENST00000600975 111 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VPS33AQ96AX1 RN7SL853P-201ENST00000617250 223 ntBASIC1.18□□□□□ -2.22
VPS33AQ96AX1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 MIR19B1-201ENST00000384829 87 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 PIGPP3-201ENST00000425307 415 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS33AQ96AX1 AC114811.1-201ENST00000507207 168 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.661-201ENST00000516003 99 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 RNU6-947P-201ENST00000516264 106 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.713-201ENST00000517013 96 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
VPS33AQ96AX1 AC093027.1-201ENST00000546698 429 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
VPS33AQ96AX1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS33AQ96AX1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.16□□□□□ -2.22
VPS33AQ96AX1 MT-TD-201ENST00000387419 68 ntBASIC1.16□□□□□ -2.22
VPS33AQ96AX1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS33AQ96AX1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS33AQ96AX1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS33AQ96AX1 MTND3P22-201ENST00000510932 243 ntBASIC1.16□□□□□ -2.22
VPS33AQ96AX1 RNU6-507P-201ENST00000516045 100 ntBASIC1.16□□□□□ -2.22
VPS33AQ96AX1 SNORD111.1-201ENST00000516421 86 ntBASIC1.16□□□□□ -2.22
VPS33AQ96AX1 AC104985.2-201ENST00000620598 500 ntBASIC1.16□□□□□ -2.22
VPS33AQ96AX1 AC112487.2-201ENST00000637950 304 ntBASIC1.16□□□□□ -2.22
VPS33AQ96AX1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 MIR522-201ENST00000385071 87 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 MIR764-201ENST00000390811 85 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 RNU6-855P-201ENST00000410395 104 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 AC024067.1-201ENST00000426199 223 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 HMGN1P7-201ENST00000491722 313 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 SNORA25.10-201ENST00000515926 124 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 RNU7-116P-201ENST00000516940 62 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS33AQ96AX1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.15□□□□□ -2.23
VPS33AQ96AX1 AL391516.1-201ENST00000554380 2449 ntBASIC1.15□□□□□ -2.23
VPS33AQ96AX1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.315-201ENST00000365117 102 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 SNORD63-201ENST00000384262 68 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 MIR15B-201ENST00000385045 98 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 RNU6-475P-201ENST00000516073 104 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.714-201ENST00000517065 90 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 AL008636.1-201ENST00000625038 1018 ntBASIC1.14□□□□□ -2.23
VPS33AQ96AX1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS33AQ96AX1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS33AQ96AX1 AC117470.1-201ENST00000381974 330 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 RNY3P14-201ENST00000384309 102 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 MIR1298-201ENST00000408783 112 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 AC063976.4-201ENST00000421971 163 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 AL591806.2-201ENST00000433122 173 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 HMGN2P32-201ENST00000444648 269 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 AC011373.1-201ENST00000607270 237 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 SNORD58B-201ENST00000607313 66 ntBASIC1.13□□□□□ -2.23
VPS33AQ96AX1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.58-201ENST00000362807 102 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.154-201ENST00000363624 102 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 RNU4-50P-201ENST00000364361 141 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 RNY3P1-201ENST00000365085 102 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 RNY3-201ENST00000365484 102 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.439-201ENST00000384119 94 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.551-201ENST00000384661 102 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 RNU4-62P-201ENST00000410125 130 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.12□□□□□ -2.23
VPS33AQ96AX1 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 U8.20-201ENST00000459445 131 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms