Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 PISRT1.1-201ENST00000616930 107 ntBASIC0.72□□□□□ -2.29
CCDC47Q96A33 RNU6-623P-201ENST00000363143 105 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC47Q96A33 RPL17P19-201ENST00000489069 552 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC47Q96A33 MIR2355-201ENST00000517199 87 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC47Q96A33 AC133485.1-201ENST00000567176 124 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 AC006380.1-201ENST00000603598 186 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 7SK.10-201ENST00000621414 298 ntBASIC0.71□□□□□ -2.3
CCDC47Q96A33 RNU6-1084P-201ENST00000362498 107 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 Y_RNA.164-201ENST00000363709 102 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 RNU6-961P-201ENST00000363893 105 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 AC117470.1-201ENST00000381974 330 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 Y_RNA.482-201ENST00000384377 111 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 MTND3P8-201ENST00000412909 339 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 AL390729.2-201ENST00000416137 156 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 MIR2053-201ENST00000459295 91 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 DEFB108E-201ENST00000524692 240 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 MIR4764-201ENST00000580680 88 ntBASIC0.7□□□□□ -2.3
CCDC47Q96A33 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC47Q96A33 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC47Q96A33 Y_RNA.253-201ENST00000364562 112 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 MIR15B-201ENST00000385045 98 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 AL031003.1-201ENST00000404229 172 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 RN7SKP164-201ENST00000516138 266 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 RNA5SP121-201ENST00000516537 101 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 RNU6-307P-201ENST00000516743 106 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 MTND4LP26-201ENST00000518144 282 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 AC055872.1-201ENST00000570978 278 ntBASIC0.69□□□□□ -2.3
CCDC47Q96A33 RNA5SP48-201ENST00000363969 126 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 RNU6-99P-201ENST00000364721 107 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 RNU6-926P-201ENST00000384075 107 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 MIR520E-201ENST00000384867 87 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 MIR522-201ENST00000385071 87 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 MTATP6P26-201ENST00000445926 662 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 SNORA25.10-201ENST00000515926 124 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 RNU7-43P-201ENST00000516554 64 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 SNORD45.4-201ENST00000516629 73 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 AC090517.2-201ENST00000614966 680 ntBASIC0.68□□□□□ -2.3
CCDC47Q96A33 Y_RNA.88-201ENST00000363029 99 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 Y_RNA.339-201ENST00000365325 102 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.67□□□□□ -2.3
CCDC47Q96A33 MRPS18CP6-201ENST00000423587 223 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 AL589823.1-201ENST00000429577 183 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 AC067940.1-201ENST00000458411 300 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 AC098869.1-201ENST00000481627 292 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 RNU6-718P-201ENST00000516166 105 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 AC022616.4-201ENST00000522985 181 ntBASIC0.67□□□□□ -2.3
CCDC47Q96A33 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
CCDC47Q96A33 Y_RNA.191-201ENST00000363972 113 ntBASIC0.66□□□□□ -2.3
CCDC47Q96A33 SNORA25.9-201ENST00000365087 128 ntBASIC0.66□□□□□ -2.3
CCDC47Q96A33 SNORA75.4-201ENST00000391278 119 ntBASIC0.66□□□□□ -2.3
CCDC47Q96A33 MIR548F1-201ENST00000408667 84 ntBASIC0.66□□□□□ -2.3
CCDC47Q96A33 MTND4P28-201ENST00000426217 387 ntBASIC0.66□□□□□ -2.3
CCDC47Q96A33 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.66□□□□□ -2.3
CCDC47Q96A33 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC47Q96A33 RNU6-1110P-201ENST00000516462 101 ntBASIC0.66□□□□□ -2.3
CCDC47Q96A33 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
CCDC47Q96A33 Y_RNA.101-201ENST00000363154 102 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 Y_RNA.172-201ENST00000363765 102 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 snoU2-30.1-201ENST00000365012 70 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 RNU6-994P-201ENST00000410507 111 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 SNORD123-201ENST00000459473 70 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 AC116353.2-201ENST00000505332 712 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 AC036111.3-201ENST00000526389 112 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 MIR4452-201ENST00000583004 71 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 uc_338.17-201ENST00000619633 179 ntBASIC0.65□□□□□ -2.31
CCDC47Q96A33 RNU6-324P-201ENST00000363957 106 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 SNORA69.1-201ENST00000390904 137 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 SNORD111-201ENST00000408139 94 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 RNU2-54P-201ENST00000410299 190 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 RNU2-61P-201ENST00000411069 191 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 HMGN2P32-201ENST00000444648 269 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 AF235103.2-201ENST00000525753 346 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 AL136317.1-201ENST00000612653 226 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 AC240442.1-201ENST00000616055 283 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CCDC47Q96A33 AC027514.1-201ENST00000588561 1603 ntBASIC0.64□□□□□ -2.31
CCDC47Q96A33 SNORD50B-201ENST00000364995 70 ntBASIC0.63□□□□□ -2.31
CCDC47Q96A33 RNU6-1215P-201ENST00000384441 102 ntBASIC0.63□□□□□ -2.31
CCDC47Q96A33 RNU6-131P-201ENST00000391144 107 ntBASIC0.63□□□□□ -2.31
CCDC47Q96A33 MIR1277-201ENST00000408536 78 ntBASIC0.63□□□□□ -2.31
CCDC47Q96A33 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.63□□□□□ -2.31
CCDC47Q96A33 RNU6-1213P-201ENST00000517075 94 ntBASIC0.63□□□□□ -2.31
CCDC47Q96A33 AC093027.1-201ENST00000546698 429 ntBASIC0.63□□□□□ -2.31
CCDC47Q96A33 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
CCDC47Q96A33 AC002553.4-201ENST00000616896 331 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 565 ms