Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 AL356280.1-201ENST00000603614 379 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 AP003357.1-201ENST00000604497 148 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 uc_338.14-201ENST00000613162 166 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 AL591926.4-201ENST00000616895 298 ntBASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SH3RF3Q8TEJ3 Y_RNA.388-201ENST00000383919 113 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-19P-201ENST00000384718 107 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 AL355796.1-201ENST00000406706 323 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 RN7SKP101-201ENST00000411376 320 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 AC007064.1-201ENST00000412238 351 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 HSPE1P21-201ENST00000438283 308 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 AC012308.1-201ENST00000451232 178 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 RPS29P24-201ENST00000486345 171 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 RPS29P21-201ENST00000496272 170 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-197P-201ENST00000516680 100 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 AC091178.2-201ENST00000584401 117 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 uc_338.28-201ENST00000612082 187 ntBASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.81□□□□□ -1.96
SH3RF3Q8TEJ3 SNORD114-7-201ENST00000362520 77 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-640P-201ENST00000363693 105 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-309P-201ENST00000364573 106 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-106P-201ENST00000384405 107 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 MIR147B-201ENST00000390185 80 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 U6atac.2-201ENST00000408644 118 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 MICF-203ENST00000432679 129 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 RPL23AP7-203ENST00000449021 469 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 SNORA70.12-201ENST00000516084 153 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 Y_RNA.677-201ENST00000516401 85 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 AC091152.3-201ENST00000604227 325 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SH3RF3Q8TEJ3 MIR21-201ENST00000362134 72 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 U8.6-201ENST00000364939 135 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 Y_RNA.348-201ENST00000365403 103 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-880P-201ENST00000384526 107 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 MIR548A1-201ENST00000385041 97 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 AL603914.1-201ENST00000401964 204 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 RNY4P30-201ENST00000410216 95 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 RNA5SP425-201ENST00000410336 112 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 AL121890.1-201ENST00000435457 205 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 AC145146.1-201ENST00000496370 254 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 RN7SKP19-201ENST00000516016 252 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 AL160236.1-201ENST00000556317 195 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 AC131055.1-201ENST00000584626 316 ntBASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
SH3RF3Q8TEJ3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-748P-201ENST00000384648 107 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 SNORA12.1-201ENST00000390873 148 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 AC018634.1-201ENST00000437554 401 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 AL031737.1-201ENST00000450125 223 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 IGKV1-22-201ENST00000524313 326 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 RPS15AP11-201ENST00000594193 385 ntBASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.78□□□□□ -1.96
SH3RF3Q8TEJ3 RNU6-674P-201ENST00000363831 107 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 MIR1185-2-201ENST00000408687 86 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 RNY4P29-201ENST00000410801 97 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 RNU2-55P-201ENST00000411146 174 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 RPS15AP28-201ENST00000435088 386 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.649-201ENST00000459077 103 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 AC090515.1-201ENST00000465295 476 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.690-201ENST00000516603 95 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 AC105137.2-201ENST00000569073 466 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 MIR4765-201ENST00000585007 77 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 POLR3GP1-201ENST00000594073 261 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 AL121890.5-201ENST00000620848 304 ntBASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
SH3RF3Q8TEJ3 AL159152.1-201ENST00000635019 2587 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 AC080128.1-201ENST00000474389 1917 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 SNORA25.6-201ENST00000364121 118 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 RNA5SP496-201ENST00000391240 109 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 MIR873-201ENST00000401120 77 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-554P-201ENST00000410466 106 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 AL135786.1-201ENST00000415892 214 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 AL356320.1-201ENST00000429616 163 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-437P-201ENST00000459408 95 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 RPL36AP21-201ENST00000490372 323 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms