Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU6-541P-201ENST00000384709 110 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AL390729.2-201ENST00000416137 156 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AL049829.1-201ENST00000465411 156 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AC117522.1-201ENST00000509821 380 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 MIR4264-201ENST00000583520 66 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 U8.15-201ENST00000390947 134 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AL590623.1-201ENST00000427864 105 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AP000542.1-201ENST00000448473 371 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 RNU7-51P-201ENST00000516560 62 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 BNIP3P40-201ENST00000596017 556 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 RNU5B-1-201ENST00000363286 116 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 SNORD93-201ENST00000408813 74 ntBASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.57□□□□□ -2.5
ALMS1Q8TCU4 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 AL356055.1-201ENST00000602528 446 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 AC072039.2-201ENST00000608883 439 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 RNU4-55P-201ENST00000410731 137 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 SEPT14P24-201ENST00000447236 180 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 RNU6-329P-201ENST00000459618 107 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 MIR3912-201ENST00000577566 105 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 MIR4280-201ENST00000582178 76 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 POLR3GP2-201ENST00000588366 668 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 AC097478.2-201ENST00000610572 514 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 AC010332.2-201ENST00000613083 1904 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 snoU13.16-201ENST00000459350 104 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 MTND3P25-201ENST00000509243 135 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 RNU6-150P-201ENST00000516237 95 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 RNA5SP54-201ENST00000516951 92 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 MIR4306-201ENST00000583390 91 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 SNORA43.4-201ENST00000629559 138 ntBASIC-0.58□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 SNORA1.2-201ENST00000365189 134 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RNU6-784P-201ENST00000384330 106 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 MT-TF-201ENST00000387314 71 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 MTCYBP4-201ENST00000401524 249 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 MTCO2P11-201ENST00000431069 680 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 SNRPGP10-201ENST00000432323 225 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AL358934.1-201ENST00000432346 324 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RPL23AP75-201ENST00000491601 451 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 BNIP3P39-201ENST00000601077 554 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AL445435.1-201ENST00000604232 665 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AF250324.2-201ENST00000608299 610 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 SNORD87-201ENST00000364849 89 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RNY4P28-201ENST00000365281 93 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RNU6-827P-201ENST00000365553 106 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 MTCO3P8-201ENST00000453691 755 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 SNORD123-201ENST00000459473 70 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AF186996.7-201ENST00000492781 209 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AC005178.1-201ENST00000508392 440 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RNU6-107P-201ENST00000516643 102 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 MIR4762-201ENST00000585261 75 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RNU4-1-201ENST00000363925 141 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 EPS15P1-201ENST00000448836 336 ntBASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.59□□□□□ -2.5
ALMS1Q8TCU4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 SUMO1P3-201ENST00000439961 304 ntBASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 MTCO3P38-201ENST00000468910 766 ntBASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 AC105417.1-201ENST00000514691 285 ntBASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.6□□□□□ -2.5
ALMS1Q8TCU4 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.6□□□□□ -2.51
ALMS1Q8TCU4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.6□□□□□ -2.51
ALMS1Q8TCU4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms