Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC024995.1-201ENST00000523014 93 ntBASIC2.5□□□□□ -2.01
HIPK4Q8NE63 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
HIPK4Q8NE63 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HIPK4Q8NE63 AL365361.1-201ENST00000566942 3481 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNU1-58P-201ENST00000362413 163 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.111-201ENST00000363248 100 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNU4-11P-201ENST00000365287 132 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.343-201ENST00000365354 112 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 SNORA9-201ENST00000384215 133 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNU6-768P-201ENST00000384683 107 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.621-201ENST00000411065 96 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNU2-55P-201ENST00000411146 174 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 AC011753.1-201ENST00000451001 220 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 AC233266.1-201ENST00000454518 96 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.49□□□□□ -2.01
HIPK4Q8NE63 S100A11P2-201ENST00000467589 312 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 TRBV12-1-201ENST00000479785 344 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNU6-426P-201ENST00000516464 97 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNA5SP137-201ENST00000516833 135 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 MIR3126-201ENST00000577443 74 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 AP001485.1-201ENST00000604799 199 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 AC242852.1-201ENST00000612151 96 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 AC244015.1-201ENST00000622301 99 ntBASIC2.49□□□□□ -2.01
HIPK4Q8NE63 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
HIPK4Q8NE63 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.253-201ENST00000364562 112 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.267-201ENST00000364679 109 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.432-201ENST00000384087 111 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 RNU1-52P-201ENST00000384190 164 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 SNORA48.2-201ENST00000390926 124 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.48□□□□□ -2.01
HIPK4Q8NE63 NDUFA4P2-201ENST00000489989 244 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 MIR548X2-201ENST00000579776 100 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.48□□□□□ -2.01
HIPK4Q8NE63 MIR203B-201ENST00000636080 86 ntBASIC2.48□□□□□ -2.01
HIPK4Q8NE63 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HIPK4Q8NE63 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HIPK4Q8NE63 RNU6-81P-201ENST00000365608 104 ntBASIC2.47□□□□□ -2.01
HIPK4Q8NE63 Y_RNA.497-201ENST00000384447 98 ntBASIC2.47□□□□□ -2.01
HIPK4Q8NE63 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.47□□□□□ -2.01
HIPK4Q8NE63 HMGN1P7-201ENST00000491722 313 ntBASIC2.47□□□□□ -2.01
HIPK4Q8NE63 RNA5SP272-201ENST00000516095 111 ntBASIC2.47□□□□□ -2.01
HIPK4Q8NE63 RNU6-197P-201ENST00000516680 100 ntBASIC2.47□□□□□ -2.01
HIPK4Q8NE63 AL358944.1-201ENST00000528537 144 ntBASIC2.47□□□□□ -2.01
HIPK4Q8NE63 AL160236.1-201ENST00000556317 195 ntBASIC2.47□□□□□ -2.01
HIPK4Q8NE63 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.47□□□□□ -2.01
HIPK4Q8NE63 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.47□□□□□ -2.01
HIPK4Q8NE63 SNORA1B-201ENST00000362535 133 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 Y_RNA.393-201ENST00000383936 102 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 SNORA44-201ENST00000384584 132 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 MIR1283-2-201ENST00000408621 87 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AC087499.2-201ENST00000432861 149 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AL606517.2-201ENST00000442855 241 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.46□□□□□ -2.02
HIPK4Q8NE63 RNU6-1299P-201ENST00000516316 100 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 MIR3200-201ENST00000580767 85 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AC005786.1-201ENST00000588553 154 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AC022217.4-201ENST00000604389 163 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AL137790.1-201ENST00000634283 177 ntBASIC2.46□□□□□ -2.02
HIPK4Q8NE63 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HIPK4Q8NE63 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HIPK4Q8NE63 AC245060.5-201ENST00000610778 3293 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
HIPK4Q8NE63 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RNU6-978P-201ENST00000364371 103 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RNU1-112P-201ENST00000364401 164 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RNU6-1138P-201ENST00000365359 106 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 SNORA79-201ENST00000408376 140 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RPS27P1-201ENST00000450552 247 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 AC023449.1-201ENST00000454464 154 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RNU7-197P-201ENST00000458836 62 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RNU7-94P-201ENST00000459576 63 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 SNORA25.12-201ENST00000516202 82 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 RNU7-149P-201ENST00000516739 59 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 MIR3646-201ENST00000578301 84 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 MIR378D2-201ENST00000580636 98 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.45□□□□□ -2.02
HIPK4Q8NE63 AC097639.2-201ENST00000603159 172 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 AC005000.2-201ENST00000605468 310 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.45□□□□□ -2.02
HIPK4Q8NE63 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HIPK4Q8NE63 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HIPK4Q8NE63 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HIPK4Q8NE63 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HIPK4Q8NE63 Y_RNA.91-201ENST00000363042 107 ntBASIC2.44□□□□□ -2.02
HIPK4Q8NE63 Y_RNA.521-201ENST00000384560 114 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms