Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC89Q8N998 MIR4659A-201ENST00000580269 81 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 MIR3192-201ENST00000584920 77 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 AC005972.2-201ENST00000604690 348 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
CCDC89Q8N998 MIR378A-201ENST00000362177 66 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 RNU6-1084P-201ENST00000362498 107 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 RNU6-490P-201ENST00000362985 107 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 MIR15B-201ENST00000385045 98 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 RNU6-1199P-201ENST00000411249 104 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 RPL23AP36-201ENST00000413895 458 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 RNU6-436P-201ENST00000516171 114 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 Y_RNA.714-201ENST00000517065 90 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.07□□□□□ -2.24
CCDC89Q8N998 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC89Q8N998 RNA5SP99-201ENST00000364020 114 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 RNY3P11-201ENST00000364153 102 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 AC117470.1-201ENST00000381974 330 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 Y_RNA.474-201ENST00000384341 102 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 MIR522-201ENST00000385071 87 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 MLLT10P1-201ENST00000418346 262 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 ACA64.5-201ENST00000516207 127 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 SNORA74.3-201ENST00000517108 154 ntBASIC1.06□□□□□ -2.24
CCDC89Q8N998 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC89Q8N998 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC89Q8N998 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC89Q8N998 AL391987.6-201ENST00000305671 199 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 Y_RNA.253-201ENST00000364562 112 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 SNORA72-201ENST00000384339 132 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 MIR520C-201ENST00000385005 87 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 RNU2-64P-201ENST00000411315 191 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC89Q8N998 MTCO3P10-201ENST00000455912 772 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 snoU13.25-201ENST00000458945 104 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 SNORA25.10-201ENST00000515926 124 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 SNORD45.4-201ENST00000516629 73 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 AC011476.5-201ENST00000615594 130 ntBASIC1.05□□□□□ -2.24
CCDC89Q8N998 Y_RNA.27-201ENST00000362540 103 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 snoU2-30.1-201ENST00000365012 70 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 RNU6-1297P-201ENST00000384415 104 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 MIR516B2-201ENST00000385190 85 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 RNU6-710P-201ENST00000410424 105 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 RPS3AP1-201ENST00000413190 320 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 AC098614.3-201ENST00000438957 440 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 HMGN2P32-201ENST00000444648 269 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC89Q8N998 HMGN1P7-201ENST00000491722 313 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC89Q8N998 AC022441.3-201ENST00000605737 136 ntBASIC1.04□□□□□ -2.24
CCDC89Q8N998 Y_RNA.140-201ENST00000363474 103 ntBASIC1.03□□□□□ -2.24
CCDC89Q8N998 Y_RNA.172-201ENST00000363765 102 ntBASIC1.03□□□□□ -2.24
CCDC89Q8N998 SNORD14.1-201ENST00000365609 90 ntBASIC1.03□□□□□ -2.24
CCDC89Q8N998 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC89Q8N998 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC89Q8N998 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.25
CCDC89Q8N998 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC89Q8N998 Y_RNA.146-201ENST00000363549 102 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 Y_RNA.505-201ENST00000384489 102 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 RNU6-131P-201ENST00000391144 107 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 Y_RNA.599-201ENST00000410489 109 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 RNU6-197P-201ENST00000516680 100 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 RN7SKP295-201ENST00000517264 153 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC89Q8N998 AC138305.3-201ENST00000624988 240 ntBASIC1.02□□□□□ -2.25
CCDC89Q8N998 MIR103A2-201ENST00000362154 78 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 Y_RNA.259-201ENST00000364619 101 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 Y_RNA.330-201ENST00000365230 109 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 Y_RNA.387-201ENST00000383918 102 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 MCFD2P1-201ENST00000417812 300 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 MIR4781-201ENST00000585250 76 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 VN1R91P-201ENST00000594377 169 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 RBM11P1-201ENST00000604951 799 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 U6.92-201ENST00000636464 89 ntBASIC1.01□□□□□ -2.25
CCDC89Q8N998 Y_RNA.329-201ENST00000365209 107 ntBASIC1□□□□□ -2.25
CCDC89Q8N998 RNU7-43P-201ENST00000516554 64 ntBASIC1□□□□□ -2.25
CCDC89Q8N998 SNORA18.7-201ENST00000516910 131 ntBASIC1□□□□□ -2.25
CCDC89Q8N998 AC136628.3-201ENST00000521868 290 ntBASIC1□□□□□ -2.25
CCDC89Q8N998 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1□□□□□ -2.25
CCDC89Q8N998 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1□□□□□ -2.25
CCDC89Q8N998 AP000942.3-201ENST00000603702 160 ntBASIC1□□□□□ -2.25
CCDC89Q8N998 AL355073.2-201ENST00000612106 557 ntBASIC1□□□□□ -2.25
CCDC89Q8N998 SEPT14P17-201ENST00000617978 177 ntBASIC1□□□□□ -2.25
CCDC89Q8N998 Y_RNA.384-201ENST00000383909 102 ntBASIC0.99□□□□□ -2.25
CCDC89Q8N998 MIR559-201ENST00000385188 96 ntBASIC0.99□□□□□ -2.25
CCDC89Q8N998 RNU6-482P-201ENST00000391068 107 ntBASIC0.99□□□□□ -2.25
CCDC89Q8N998 AC138393.2-201ENST00000414742 246 ntBASIC0.99□□□□□ -2.25
CCDC89Q8N998 AL390729.2-201ENST00000416137 156 ntBASIC0.99□□□□□ -2.25
CCDC89Q8N998 SNRPGP10-201ENST00000432323 225 ntBASIC0.99□□□□□ -2.25
CCDC89Q8N998 AC005042.3-201ENST00000453230 174 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms